RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SIDT2Q8NBJ9 832 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 OR2L2Q8NH16 312 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GDAP1Q8TB36 358 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CD200R1Q8TD46 325 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 LMX1AQ8TE12 382 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ANKRD49Q8WVL7 239 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 UBLCP1Q8WVY7 318 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SLC44A1Q8WWI5 657 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RUBCNQ92622 972 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ULK4Q96C45 1275 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SDCCAG3Q96C92 435 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 LINC00615Q96LM1 132 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RMDN2Q96LZ7 410 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ZIM3Q96PE6 472 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 OR2M4Q96R27 311 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PAFAH2Q99487 392 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 COPS8Q99627 209 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GPR21Q99679 349 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RBBP8Q99708 897 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NAT9Q9BTE0 207 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 EDEM2Q9BV94 578 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GTPBP2Q9BX10 602 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NUSAP1Q9BXS6 441 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 FAM129AQ9BZQ8 928 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 OR52A5Q9H2C5 316 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 COG4Q9H9E3 785 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 VPS37BQ9H9H4 285 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ERVMER34-1Q9H9K5 563 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PHPT1Q9NRX4 125 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TAAR2Q9P1P5 351 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF624Q9P2J8 865 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 TBC1D29Q9UFV1 150 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 MTRF1LQ9UGC7 380 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 APOBEC3BQ9UH17 382 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 CIDEBQ9UHD4 219 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GMEB2Q9UKD1 530 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 FBXO5Q9UKT4 447 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 PSMD13Q9UNM6 376 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 GPR34Q9UPC5 381 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 RUVBL2Q9Y230 463 aaKnown RBP2.79□□□□□ -1.96
CSDE1-208ENST00000524652 DNAJC16Q9Y2G8 782 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 NBEAL1Q6ZS30 2694 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SPG11Q96JI7 2443 aa2.79□□□□□ -1.96
CSDE1-208ENST00000524652 SEC16AO15027 2179 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 A0A087WUV0 522 aaPredicted RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 UQCRHLA0A096LP55 91 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 C17orf113A0A1B0GUU1 675 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 A0A1W2PPM1 405 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 hDV102S1A0JD36 115 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 GPR89AB7ZAQ6 455 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 LMO7DNF2Z398 122 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 H3BMM5 538 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 P2RY10O00398 339 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 PRMT5O14744 637 aaPredicted RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 NDC80O14777 642 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 KMOO15229 486 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 SH3BP5O60239 455 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 LRP3O75074 770 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 NDUFS3O75489 264 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 TIPRLO75663 272 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 POP7O75817 140 aaKnown RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 KDM4BO94953 1096 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 AP2A2O94973 939 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 TRIM16O95361 564 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 CSTBP04080 98 aaKnown RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 PYGLP06737 847 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 UQCRHP07919 91 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ABHD2P08910 425 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 GSTA2P09210 222 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 NUDT17P0C025 328 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 OR56A5P0C7T3 313 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 GPR89BP0CG08 455 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF883P0CG24 379 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 SLC35E2BP0CK96 405 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 MCM3P25205 808 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ACADLP28330 430 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 PEBP1P30086 187 aaKnown RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 STX2P32856 288 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 GP5P40197 560 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ACTR1BP42025 376 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 HTR3AP46098 478 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 BDKRB1P46663 353 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 SLCO1A2P46721 670 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 CD151P48509 253 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 VEGFCP49767 419 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 CLCNKAP51800 687 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 LIMK2P53671 638 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 PRKAA2P54646 552 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 MAZP56270 477 aaKnown RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 C21orf59P57076 290 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 TAS2R39P59534 338 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ACTR1AP61163 376 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 HNRNPKP61978 463 aaKnown RBP eCLIP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 PPP1CAP62136 330 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 UBE2IP63279 158 aaKnown RBP2.78□□□□□ -1.96
CSDE1-208ENST00000524652 OVGP1Q12889 678 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 BLMHQ13867 455 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 SLMAPQ14BN4 828 aa2.78□□□□□ -1.96
CSDE1-208ENST00000524652 ZKSCAN8Q15776 578 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms