RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	HYKK	A2RU49	373 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	KRT87P	A6NCN2	255 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	PDZK1P1	A8MUH7	402 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CACNB4	O00305	520 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	AP3D1	O14617	1153 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	PCDH17	O14917	1159 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	KPNA5	O15131	536 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	TPST2	O60704	377 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CS	O75390	466 aa	Known RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ADA	P00813	363 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	TP53	P04637	393 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	FURIN	P09958	794 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF883	P0CG24	379 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SRC	P12931	536 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ETFA	P13804	333 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ATP1B2	P14415	290 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	RHCE	P18577	417 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	HIST1H2AD	P20671	130 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CD27	P26842	260 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SERPINA4	P29622	427 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CSTF2	P33240	577 aa	Known RBP eCLIP	7.38	□□□□□ -1.23	1e-11	■■■■□ 21.8
SPIDR-223	ENST00000524033	NNMT	P40261	264 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPINT3	P49223	89 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRIM2	P49643	509 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDC42	P60953	191 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDK10	Q15131	360 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SF1	Q15637	639 aa	Known RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CST6	Q15828	149 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRSS53	Q2L4Q9	553 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF630	Q2M218	657 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPANXN2	Q5MJ10	180 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	FRMPD2B	Q6IN97	320 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM71E1	Q6IPT2	247 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ERAP2	Q6P179	960 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	C22orf39	Q6P5X5	142 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF517	Q6ZMY9	492 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	DBX2	Q6ZNG2	339 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	USP30	Q70CQ3	517 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	KRT73	Q86Y46	540 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	WFDC8	Q8IUA0	241 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	RDH10	Q8IZV5	341 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	OXR1	Q8N573	874 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	IL22RA1	Q8N6P7	574 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR2AP1	Q8NGE2	309 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR4A15	Q8NGL6	344 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	NFKBID	Q8NI38	313 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SPPL2A	Q8TCT8	520 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC7A6	Q92536	515 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SCRN2	Q96FV2	425 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRMT61A	Q96FX7	289 aa	Known RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	HIST1H2AH	Q96KK5	128 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	MRGPRX3	Q96LB0	322 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	NEDD4L	Q96PU5	975 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDC6	Q99741	560 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	HIST1H2AJ	Q99878	128 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	H2AFJ	Q9BTM1	129 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	ASPN	Q9BXN1	380 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CPEB1	Q9BZB8	566 aa	Known RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	MIXL1	Q9H2W2	232 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	REEP4	Q9H6H4	257 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	NMNAT1	Q9HAN9	279 aa	Predicted RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	AMBN	Q9NP70	447 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	CLN6	Q9NWW5	311 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	NDUFB11	Q9NX14	153 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	MS4A12	Q9NXJ0	267 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SNX11	Q9Y5W9	270 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLCO1B1	Q9Y6L6	691 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	MAU2	Q9Y6X3	613 aa		7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SMG1	Q96Q15	3661 aa	Known RBP	7.38	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC5A10	A0PJK1	596 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	TSPAN11	A1L157	253 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	LRRC72	A6NJI9	287 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033		A6NL46	340 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033		J3KTA2	159 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	FOXE1	O00358	373 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	MID1	O15344	667 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBX19	O60806	448 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	C6orf47	O95873	294 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	HLA-DQB1	P01920	261 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ALPP	P05187	535 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	KRT8	P05787	483 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ANXA4	P09525	319 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	FTH1P19	P0C7X4	201 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	IL7	P13232	177 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	DDX5	P17844	614 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	MAG	P20916	626 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	IMPA1	P29218	277 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	IDH2	P48735	452 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ARL4D	P49703	201 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	GAS1	P54826	345 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	RACK1	P63244	317 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	HBA1	P69905	142 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDK6	Q00534	326 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ALDH6A1	Q02252	535 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	CHRNE	Q04844	493 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF763	Q0D2J5	394 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	MLLT11	Q13015	90 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ILK	Q13418	452 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms