RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 IL1AP01583 271 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 LIMS3P0CW19 117 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 LIMS4P0CW20 117 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ERGP11308 486 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 KELP23276 732 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 NCBP2P52298 156 aaKnown RBP eCLIP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 EPHA5P54756 1037 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 WNT4P56705 351 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CD83Q01151 205 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 BNC1Q01954 994 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 GRASPQ7Z6J2 395 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 LHFPL3Q86UP9 236 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 TRIM69Q86WT6 500 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 NUDT13Q86X67 352 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 OR5K2Q8NHB8 316 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 LRIG1Q96JA1 1093 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 GDF15Q99988 308 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 AIF1LQ9BQI0 150 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 NDEL1Q9GZM8 345 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 B3GAT2Q9NPZ5 323 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 AHSPQ9NZD4 102 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 MARK1Q9P0L2 795 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 COMMD3Q9UBI1 195 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SNX7Q9UNH6 387 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 MUC22E2RYF6 1773 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SPEGQ15772 3267 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 C17orf113A0A1B0GUU1 675 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 PCCBP05166 539 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 HMGN2P05204 90 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 NAT2P11245 290 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ADH5P11766 374 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 PPM1AP35813 382 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CCR8P51685 355 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 REEP5Q00765 189 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ASAH1Q13510 395 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 PYDC2Q56P42 97 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 PDZK1Q5T2W1 519 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 RNLSQ5VYX0 342 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 C1orf94Q6P1W5 598 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 PRICKLE2Q7Z3G6 844 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 AMZ2Q86W34 360 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 C7orf57Q8NEG2 295 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 OR4F15Q8NGB8 312 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 NECTIN4Q96NY8 510 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 TMEM246Q9BRR3 403 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 WASH6PQ9NQA3 447 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CHST2Q9Y4C5 530 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 A0A0A6YYD5 115 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ABHD14A-ACY1A0A1B0GW23 586 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CPSF4LA6NMK7 179 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 POLR1CO15160 346 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 HPGDSO60760 199 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 EPCAMP16422 314 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 DDX5P17844 614 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 VIPR2P41587 438 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SCN1BQ07699 218 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CDK10Q15131 360 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 GPAT3Q53EU6 434 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SNAP47Q5SQN1 464 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 TMEM107Q6UX40 140 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 B3GLCTQ6Y288 498 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 QSOX2Q6ZRP7 698 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 FAM92BQ6ZTR7 304 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ASCC1Q8N9N2 400 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 BBS1Q8NFJ9 593 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SUN3Q8TAQ9 357 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SLC7A6Q92536 515 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 CNRIP1Q96F85 164 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 ART5Q96L15 291 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 KCTD7Q96MP8 289 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SNX18Q96RF0 628 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 TRMT61BQ9BVS5 477 aaKnown RBP7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SLC22A4Q9H015 551 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SAP130Q9H0E3 1048 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 GPR34Q9UPC5 381 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 SCN2AQ99250 2005 aa7.53□□□□□ -1.2
TNFRSF10B-208ENST00000523752 FAM172BPA6NC97 362 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 CENPXA8MT69 81 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 TBX19O60806 448 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 LGI1O95970 557 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 PRNPP04156 253 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 MYL12AP19105 171 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 PPP2R1BP30154 601 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 TRHRP34981 398 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 SSR2P43308 183 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 SLC9A3P48764 834 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 CLCNKAP51800 687 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 CSNK1G2P78368 415 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 DPTQ07507 201 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 NDUFA5Q16718 116 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 PLK5Q496M5 336 aa7.52□□□□□ -1.21
TNFRSF10B-208ENST00000523752 ZNF628Q5EBL2 1059 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms