RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 OR52A4PA6NMU1 304 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 I6L893 689 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 CES2O00748 559 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 GSTA4O15217 222 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PJA2O43164 708 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TBX1O43435 398 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RGS9O75916 674 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RECQL5O94762 991 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 MT-ATP6P00846 226 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 F7P08709 466 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PPP3CBP16298 524 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 DRD5P21918 477 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TUBG1P23258 451 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ITPKAP23677 461 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 CASP1P29466 404 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FOXN2P32314 431 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RFC3P40938 356 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RPS5P46782 204 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SCAND1P57086 179 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 DAOAP59103 153 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ERVS71-1P61550 626 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 E2F1Q01094 437 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 HYAL2Q12891 473 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ITPRIPL2Q3MIP1 535 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF628Q5EBL2 1059 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 LRIF1Q5T3J3 769 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RNLSQ5VYX0 342 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ATG9BQ674R7 924 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 C11orf63Q6NUN7 778 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FAHD2BQ6P2I3 314 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NXPE4Q6UWF7 544 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ASCL5Q7RTU5 278 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 KANSL1Q7Z3B3 1105 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TIPARPQ7Z3E1 657 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 YRDCQ86U90 279 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 CMTM8Q8IZV2 173 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PRSS35Q8N3Z0 413 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SPEM1Q8N4L4 309 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FAM46DQ8NEK8 389 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 OR5B17Q8NGF7 314 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 OR8J1Q8NGP2 316 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 OR51A7Q8NH64 312 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 GLYATL2Q8WU03 294 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FAHD2AQ96GK7 314 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SH3YL1Q96HL8 342 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 KCNA7Q96RP8 456 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SLC22A12Q96S37 553 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 CHP1Q99653 195 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PLA2G2FQ9BZM2 168 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ELOVL4Q9GZR5 314 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TRABDQ9H4I3 376 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 ZCCHC4Q9H5U6 513 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FAM124BQ9H5Z6 455 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 RPF2Q9H7B2 306 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 GPN2Q9H9Y4 310 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 AKIP1Q9NQ31 210 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 TUBG2Q9NRH3 451 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 FAM212BQ9NTI7 297 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 HIF1ANQ9NWT6 349 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 MRPL22Q9NWU5 206 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 CNOT8Q9UFF9 292 aaKnown RBP7.12□□□□□ -1.27
HDAC3-216ENST00000523088 PSG11Q9UQ72 335 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 SLC22A13Q9Y226 551 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 OR51B4Q9Y5P0 310 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 WIF1Q9Y5W5 379 aa7.12□□□□□ -1.27
HDAC3-216ENST00000523088 NCANO14594 1321 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TRBV23-1A0A0A0MS06 115 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 TMEM191CA6NGB0 347 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 DUXAA6NLW8 204 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 A8MUA0 341 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MKRN2OSH3BPM6 223 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PDXKO00764 312 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 COPEO14579 308 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 GSC2O15499 205 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 OR10H3O60404 316 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 LRP3O75074 770 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 ZMPSTE24O75844 475 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 KRT33AO76009 404 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 BCL10O95999 233 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MT-ND5P03915 603 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 PFKFB1P16118 471 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 DRD1P21728 446 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 GLRA1P23415 457 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CTSSP25774 331 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 UCP1P25874 307 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 C21orf33P30042 268 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-216ENST00000523088 VIPR2P41587 438 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 MAGEA3P43357 314 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 CXCL12P48061 93 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 NPY4RP50391 375 aa7.11□□□□□ -1.27
HDAC3-216ENST00000523088 NUDT6P53370 316 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms