RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF2-204	ENST00000522539	PSD3	Q9NYI0	1048 aa		11.17	□□□□□ -0.62
BRF2-204	ENST00000522539	NUDT4	Q9NZJ9	180 aa		11.17	□□□□□ -0.62
BRF2-204	ENST00000522539	TRPS1	Q9UHF7	1281 aa		11.17	□□□□□ -0.62
BRF2-204	ENST00000522539	DTX4	Q9Y2E6	619 aa		11.17	□□□□□ -0.62
BRF2-204	ENST00000522539	EXOC1L	A0A1B0GW35	172 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539		H0YIV9	168 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	HCRTR2	O43614	444 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PPM1B	O75688	479 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PIAS1	O75925	651 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	CRH	P06850	196 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	FAM58BP	P0C7Q3	252 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PAX1	P15863	534 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	FPR1	P21462	350 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	GPX3	P22352	226 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	CRYGS	P22914	178 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PTX3	P26022	381 aa	Predicted RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	LOX	P28300	417 aa	Predicted RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	LHX2	P50458	406 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	DIO3	P55073	304 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	RPS13	P62277	151 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	CUL3	Q13618	768 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	SETDB1	Q15047	1291 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	TOMM20	Q15388	145 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	UBAP2	Q5T6F2	1119 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	HLA-DQA1	Q5Y7H0	255 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	OR52E8	Q6IFG1	317 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	SCIMP	Q6UWF3	145 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	ENPP6	Q6UWR7	440 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	C20orf204	Q6ZNR8	217 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	RIBC1	Q8N443	379 aa	Predicted RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	WDSUB1	Q8N9V3	476 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	OR7G1	Q8NGA0	311 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	STAG3L4	Q8TBR4	150 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	NANOS1	Q8WY41	292 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PGM2	Q96G03	612 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	WFIKKN1	Q96NZ8	548 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	NODAL	Q96S42	347 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	ATOH8	Q96SQ7	321 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	MTERF1	Q99551	399 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	REPIN1	Q9BWE0	567 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	NXF5	Q9H1B4	397 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	RNF112	Q9ULX5	631 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	EXO1	Q9UQ84	846 aa	Known RBP	11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	PCDHGA11	Q9Y5H2	935 aa		11.16	□□□□□ -0.62
BRF2-204	ENST00000522539	CUBN	O60494	3623 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539		A0A1W2PNV4	684 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CXorf49	A8MYA2	514 aa	Predicted RBP	11.15	□□□□□ -0.62
BRF2-204	ENST00000522539		H0Y3Z8	333 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	SMAD7	O15105	426 aa	Known RBP	11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	PGRMC2	O15173	223 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	KERA	O60938	352 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	ICOSLG	O75144	302 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CBR3	O75828	277 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	GSTA2	P09210	222 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	MTHFD2	P13995	350 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	STMN1	P16949	149 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	ZNF708	P17019	499 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CCKAR	P32238	428 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	GCK	P35557	465 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CLDN18	P56856	261 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	RAB10	P61026	200 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	PPP2R2B	Q00005	443 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	FAM27E3	Q08E93	113 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	MGAT2	Q10469	447 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	DLG1	Q12959	904 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	DDX39B	Q13838	428 aa	Known RBP	11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	LIPJ	Q5W064	366 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	DESI1	Q6ICB0	168 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	PLXDC2	Q6UX71	529 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CYS1	Q717R9	158 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	NUP54	Q7Z3B4	507 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	TRIM42	Q8IWZ5	723 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	PRR22	Q8IZ63	422 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	GCNT2	Q8N0V5	402 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	STARD4	Q96DR4	205 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	RBBP8	Q99708	897 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CCL19	Q99731	98 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	CPNE1	Q99829	537 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	OSBPL11	Q9BXB4	747 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	METTL7A	Q9H8H3	244 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	WDR41	Q9HAD4	459 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	SERHL	Q9NQF3	203 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	ZNF226	Q9NYT6	803 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	OPTC	Q9UBM4	332 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	DLGAP4	Q9Y2H0	992 aa		11.15	□□□□□ -0.62
BRF2-204	ENST00000522539	FOXE1	O00358	373 aa	Predicted RBP	11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	PLOD2	O00469	737 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	ACOX3	O15254	700 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	UGDH	O60701	494 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	CRLF1	O75462	422 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	SEMA3D	O95025	777 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	TGM6	O95932	706 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	S100B	P04271	92 aa	Predicted RBP	11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	CPM	P14384	443 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	EPB42	P16452	691 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	STX2	P32856	288 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	GMPR	P36959	345 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	CD79B	P40259	229 aa		11.14	□□□□□ -0.63
BRF2-204	ENST00000522539	KRTAP1-1	Q07627	177 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms