RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ACOX3O15254 700 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 REM1O75628 298 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 BMP7P18075 431 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 NAGLUP54802 743 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 C2orf80Q0P641 193 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 SNTB1Q13884 538 aaKnown RBP18.9■□□□□ 0.62
SDCBP-209ENST00000522243 IMPG1Q17R60 797 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 PRSS53Q2L4Q9 553 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 DCST1Q5T197 706 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 SLC30A6Q6NXT4 461 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 CLYBLQ8N0X4 340 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 CCDC63Q8NA47 563 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 TNIP2Q8NFZ5 429 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 RDH11Q8TC12 318 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 EPS8L3Q8TE67 593 aaKnown RBP18.9■□□□□ 0.62
SDCBP-209ENST00000522243 C11orf24Q96F05 449 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-209ENST00000522243 UGT2B28Q9BY64 529 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 SHCBP1LQ9BZQ2 653 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 TNFRSF12AQ9NP84 129 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 MAPRE3Q9UPY8 281 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 GPR55Q9Y2T6 319 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-209ENST00000522243 POLR3HQ9Y535 204 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-209ENST00000522243 SERTM1A2A2V5 107 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 SNPHO15079 494 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 PLIN3O60664 434 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 CDH16O75309 829 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 CRCPO75575 148 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 DLX5P56178 289 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 CORO7P57737 925 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 ACSF3Q4G176 576 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-209ENST00000522243 VASNQ6EMK4 673 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 GALNT18Q6P9A2 607 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 NAXEQ8NCW5 288 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 FAM83FQ8NEG4 500 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-209ENST00000522243 BBS4Q96RK4 519 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 ZNF559Q9BR84 538 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 SERHLQ9NQF3 203 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 GRID1Q9ULK0 1009 aa18.89■□□□□ 0.61
SDCBP-209ENST00000522243 LRBAP50851 2863 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 PRAMEF25A6NGN4 478 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 HSPB2A8KAH6 182 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 FAM47E-STBD1D6RA91 191 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 TO15178 435 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 ERN1O75460 977 aaKnown RBP18.88■□□□□ 0.61
SDCBP-209ENST00000522243 BCAS2O75934 225 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-209ENST00000522243 EPPINO95925 133 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CT45A8P0DMV1 189 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CT45A9P0DMV2 189 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 POU3F2P20265 443 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CAPN3P20807 821 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CCT5P48643 541 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 ZNF763Q0D2J5 394 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 MYBPHQ13203 477 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 HSPB2Q16082 182 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 ERCC6LQ2NKX8 1250 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 SLC25A35Q3KQZ1 300 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CCDC153Q494R4 210 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CT45A2Q5DJT8 189 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 CFAP157Q5JU67 520 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 TMEM81Q6P7N7 255 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 NPSR1Q6W5P4 371 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 SAMD14Q8IZD0 417 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-209ENST00000522243 FAM9CQ8IZT9 166 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 OR7G2Q8NG99 324 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 ABTB1Q969K4 478 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-209ENST00000522243 WDYHV1Q96HA8 205 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 COL21A1Q96P44 957 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 ADOQ96SZ5 270 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 PRDM14Q9GZV8 571 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 FOLH1BQ9HBA9 442 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 SIRT5Q9NXA8 310 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 SENP1Q9P0U3 644 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 PDZD2O15018 2839 aa18.88■□□□□ 0.61
SDCBP-209ENST00000522243 JUNP05412 331 aaKnown RBP18.87■□□□□ 0.61
SDCBP-209ENST00000522243 DDCP20711 480 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 CRHR1P34998 444 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 CEBPEQ15744 281 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 FRMD7Q6ZUT3 714 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 CDH24Q86UP0 819 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 PM20D2Q8IYS1 436 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 CNPY4Q8N129 248 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 C4orf33Q8N1A6 199 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 WDSUB1Q8N9V3 476 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 RELL2Q8NC24 303 aaPredicted RBP18.87■□□□□ 0.61
SDCBP-209ENST00000522243 OR4N2Q8NGD1 307 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 TMCO6Q96DC7 493 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 VSTM2LQ96N03 204 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 BTBD9Q96Q07 612 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 TRIB1Q96RU8 372 aa18.87■□□□□ 0.61
SDCBP-209ENST00000522243 EXO1Q9UQ84 846 aaKnown RBP18.87■□□□□ 0.61
SDCBP-209ENST00000522243 OR6C70A6NIJ9 312 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 COPEO14579 308 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 TSPAN2O60636 221 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 CPA3P15088 417 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 BMP5P22003 454 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 MPIP34949 423 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 GSTM5P46439 218 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 NCBP2P52298 156 aaKnown RBP eCLIP18.86■□□□□ 0.61
SDCBP-209ENST00000522243 DNAJB13P59910 316 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 SNTA1Q13424 505 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms