RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 DLEU7Q6UYE1 221 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 Q6ZSR9 355 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 LANCL3Q6ZV70 420 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 KCTD8Q6ZWB6 473 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 ABHD13Q7L211 337 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 ZNF554Q86TJ5 538 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 MICU2Q8IYU8 434 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 KRT78Q8N1N4 520 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 GALNT16Q8N428 558 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SVOPQ8N4V2 548 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SMYD1Q8NB12 490 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 TTLQ8NG68 377 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 OR4F6Q8NGB9 312 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 OR51Q1Q8NH59 317 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 UTP15Q8TED0 518 aaKnown RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 TRUB1Q8WWH5 349 aaKnown RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 S100ZQ8WXG8 99 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 TMBIM1Q969X1 311 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 GAL3ST3Q96A11 431 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 FAM162AQ96A26 154 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 TESCQ96BS2 214 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SLC47A1Q96FL8 570 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PEX11GQ96HA9 241 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 COG8Q96MW5 612 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SEPHS2Q99611 448 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 EFCAB11Q9BUY7 163 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 REPIN1Q9BWE0 567 aaKnown RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PITHD1Q9GZP4 211 aaPredicted RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 GABARAPL1Q9H0R8 117 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 KLHL31Q9H511 634 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 CLMPQ9H6B4 373 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 NT5DC2Q9H857 520 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 LRTM1Q9HBL6 345 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 LANCL2Q9NS86 450 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 FAIMQ9NVQ4 179 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 C1orf109Q9NX04 203 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 CHCHD3Q9NX63 227 aaKnown RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 GIN1Q9NXP7 522 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 RPS6KA6Q9UK32 745 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 ITGB1BP2Q9UKP3 347 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 MKL2Q9ULH7 1088 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PCDHGB4Q9UN71 923 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SNX6Q9UNH7 406 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 POLR3HQ9Y535 204 aaPredicted RBP6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PCDHGB5Q9Y5G0 923 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PCDHGB1Q9Y5G3 927 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 PCDHGA11Q9Y5H2 935 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 SCN3AQ9NY46 2000 aa6.38□□□□□ -1.39
SPIDR-218ENST00000522222 LOC102723996A0A087X1L8 192 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 MYOCOSA0A1B0GUC4 107 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 A0A1W2PQ72 361 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 OR2W5A6NFC9 320 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 URADA6NGE7 173 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 EVPLLA8MZ36 301 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 C3orf80F5H4A9 247 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PYCARD-AS1I3L0S3 204 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CXCR6O00574 342 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PPP6CO00743 305 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 OR7A17O14581 309 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SLC22A1O15245 554 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SLC16A6O15403 523 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 ERI3O43414 337 aaKnown RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SUV39H1O43463 412 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CHST10O43529 356 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 UGDHO60701 494 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 DPM1O60762 260 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 DNAJB6O75190 326 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CLEC3AO75596 197 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CDC123O75794 336 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SEC24DO94855 1032 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CLDN9O95484 217 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SNAP29O95721 258 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 TBX6O95947 436 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 HPP00738 406 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CST1P01037 141 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PGRP06401 933 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CELA2AP08217 269 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CYC1P08574 325 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 GNAO1P09471 354 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 C8orf89P0DMQ9 161 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 G6PDP11413 515 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CRHBPP24387 322 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 CXCR2P25025 360 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 ITGA3P26006 1051 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PTX3P26022 381 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 TRPC1P48995 793 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 OR4D2P58180 307 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 STXBP1P61764 594 aaKnown RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 SKP1P63208 163 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 LSM11P83369 360 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 RHAGQ02094 409 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 Q0VFX4 171 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 AIMP2Q13155 320 aaKnown RBP6.37□□□□□ -1.39
SPIDR-218ENST00000522222 TMED1Q13445 227 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 KEAP1Q14145 624 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 E2F2Q14209 437 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 PCOLCEQ15113 449 aa6.37□□□□□ -1.39
SPIDR-218ENST00000522222 RUNDC3AQ59EK9 446 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms