RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	SDC3	O75056	442 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	POP4	O95707	220 aa	Known RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	MBD3	O95983	291 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	KRT8	P05787	483 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ANXA4	P09525	319 aa	Predicted RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	HOXB7	P09629	217 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CALCB	P10092	127 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	SOX6	P35712	828 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	SLC1A4	P43007	532 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	HTR5A	P47898	357 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	GSK3B	P49841	420 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	RIDA	P52758	137 aa	Known RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CD300C	Q08708	224 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ELAVL2	Q12926	359 aa	Known RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TMEM41B	Q5BJD5	291 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	DMKN	Q6E0U4	476 aa	Predicted RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ASPHD2	Q6ICH7	369 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LRRC8B	Q6P9F7	803 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CBLN3	Q6UW01	205 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LPCAT2	Q7L5N7	544 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CENPS	Q8N2Z9	138 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	MIPOL1	Q8TD10	442 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LHX4	Q969G2	390 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	VPS39	Q96JC1	886 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	C18orf12	Q96KH6	178 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	VSTM2L	Q96N03	204 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	MCRIP2	Q9BUT9	160 aa	Known RBP	2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TUBB1	Q9H4B7	451 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	COG4	Q9H9E3	785 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ADGRL4	Q9HBW9	690 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	AGPAT5	Q9NUQ2	364 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	GHRL	Q9UBU3	117 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	SEC14L4	Q9UDX3	406 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	SLC9A8	Q9Y2E8	581 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	KIF3A	Q9Y496	699 aa		2.88	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ATAD2B	Q9ULI0	1458 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	IGHV3OR16-10	A0A075B7F0	116 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TRIM49B	A6NDI0	452 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	FBLL1	A6NHQ2	334 aa	Known RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	DCX	O43602	365 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	IGHD	P01880	384 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	DPEP1	P16444	411 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TNNI3	P19429	210 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ZNF10	P21506	573 aa	Predicted RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ADSS	P30520	456 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CYLC1	P35663	651 aa	Predicted RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ETV5	P41161	510 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ZNF85	Q03923	595 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	DCAF4L1	Q3SXM0	396 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	C14orf177	Q52M58	125 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	C9orf66	Q5T8R8	295 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	NCR3LG1	Q68D85	454 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776		Q7L0L9	218 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	P4HA3	Q7Z4N8	544 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	KRTAP7-1	Q8IUC3	87 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CENPL	Q8N0S6	344 aa	Predicted RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	STKLD1	Q8NE28	680 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	NPRL2	Q8WTW4	380 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	PINX1	Q96BK5	328 aa	Known RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	RAB3C	Q96E17	227 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	WBP1	Q96G27	269 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CASD1	Q96PB1	797 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CHCHD5	Q9BSY4	110 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TPPP3	Q9BW30	176 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TSPY26P	Q9H489	355 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	RIBC2	Q9H4K1	309 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	WDR76	Q9H967	626 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LPAR2	Q9HBW0	351 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	MUTYH	Q9UIF7	546 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	B9D1	Q9UPM9	204 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	AUP1	Q9Y679	476 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LRIT2	A6NDA9	550 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	NPIPA2	E9PIF3	369 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	MAPK13	O15264	365 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TYROBP	O43914	113 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	PDE5A	O76074	875 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CHRNA1	P02708	482 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	PCCB	P05166	539 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	FCGR3A	P08637	254 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	GSTT2	P0CG29	244 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	GSTT2B	P0CG30	244 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	DRD5	P21918	477 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	LMO2	P25791	158 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	HTR2A	P28223	471 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CAPG	P40121	348 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CSRP3	P50461	194 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ARFIP1	P53367	373 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	NOP14	P78316	857 aa	Known RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TFDP1	Q14186	410 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	PCK2	Q16822	640 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	ZNF311	Q5JNZ3	666 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	PNCK	Q6P2M8	343 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	CES3	Q6UWW8	571 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	RNF130	Q86XS8	419 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	OR10T2	Q8NGX3	314 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	OR52J3	Q8NH60	311 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	TRIM44	Q96DX7	344 aa	Predicted RBP	2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	C4orf36	Q96KX1	117 aa		2.87	□□□□□ -1.95
EFCAB13-208	ENST00000520776	AGAP3	Q96P47	875 aa		2.87	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms