RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 DCDC1P59894 354 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 CAMK1Q14012 370 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 FIGNL1Q6PIW4 674 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 NRROSQ86YC3 692 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 LINC00471Q8N535 108 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC6A13Q9NSD5 602 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 NLGN3Q9NZ94 848 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SERTAD3Q9UJW9 196 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 UGT2A1Q9Y4X1 527 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 PCDHGA6Q9Y5G7 932 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 A0A1W2PRQ8 180 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 C2orf74A8MZ97 194 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 RBMXL2O75526 392 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC6A9P48067 706 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 CTSCP53634 463 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 WDR5P61964 334 aaKnown RBP10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 SGCBQ16585 318 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 GDPD3Q7L5L3 318 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 KLHDC8AQ8IYD2 350 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 YIPF7Q8N8F6 280 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR2AJ1Q8NGZ0 328 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MYEOVQ96EZ4 313 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 MACROD1Q9BQ69 325 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 GABARAPL1Q9H0R8 117 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 DZANK1Q9NVP4 752 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 PPT2Q9UMR5 302 aa10.28□□□□□ -0.76
PCDHGA1-202ENST00000517417 A0A1W2PQ09 198 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 SH3D21A4FU49 640 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZNF726A6NNF4 738 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 CCR7P32248 378 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 PTGER1P34995 402 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 PCGF2P35227 344 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 RBBP4Q09028 425 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 LRIF1Q5T3J3 769 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR2L5Q8NG80 312 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 TGM7Q96PF1 710 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 TRIM36Q9NQ86 728 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 IL20RAQ9UHF4 553 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 PCDHGA3Q9Y5H0 932 aa10.27□□□□□ -0.76
PCDHGA1-202ENST00000517417 ANHXE9PGG2 379 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PRLP01236 227 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ITGA3P26006 1051 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 HLA-FP30511 346 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 RAB28P51157 221 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 AP3S2P59780 193 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC27A4Q6P1M0 643 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TTLL10Q6ZVT0 673 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM173Q86WV6 379 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 GKN2Q86XP6 184 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 MSRB3Q8IXL7 192 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SETD6Q8TBK2 473 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ASB15Q8WXK1 588 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR5M11Q96RB7 305 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 GNG8Q9UK08 70 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PIAS3Q9Y6X2 628 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ANKRD34BA5PLL1 514 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TRIM64A6NGJ6 449 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 EIF1AYO14602 144 aaKnown RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 FHP07954 510 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TACSTD2P09758 323 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAP2K3P46734 347 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 POU6F2P78424 691 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SCRN3Q0VDG4 424 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 METTL2BQ6P1Q9 378 aaKnown RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SETD7Q8WTS6 366 aaKnown RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 NEIL2Q969S2 332 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 WACQ9BTA9 647 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 HOXD1Q9GZZ0 328 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 P2RY12Q9H244 342 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 WBP1LQ9NX94 342 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SPEF1Q9Y4P9 236 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PCDHGB1Q9Y5G3 927 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PCDHGA2Q9Y5H1 932 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 A0A1W2PPK0 400 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 C9J4A7 227 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 H3BQ06 376 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SOX1O00570 391 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ARHGAP33O14559 1287 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 HCRTR2O43614 444 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 RAB36O95755 333 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 IFITM3Q01628 133 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAB21L1Q13394 359 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 LRRC26Q2I0M4 334 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 DEFB110Q30KQ9 67 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF627Q7L945 461 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR8H3Q8N146 312 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC37A3Q8NCC5 494 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR8K3Q8NH51 312 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 LGR4Q9BXB1 951 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 NMNAT1Q9HAN9 279 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF334Q9HCZ1 680 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PRTFDC1Q9NRG1 225 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 SERINC1Q9NRX5 453 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms