RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OR56B1Q8NGI3 324 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 WDR36Q8NI36 951 aaKnown RBP3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 FAM111AQ96PZ2 611 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 TMEM231Q9H6L2 316 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 FZR1Q9UM11 496 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 MMP24Q9Y5R2 645 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 NPIPA5A0A0B4J1W7 369 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 A0A0J9YVX5 310 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 NPIPA5E9PKD4 350 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 IMPA2O14732 288 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 SDC3O75056 442 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 NUDT14O95848 222 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 CAMLGP49069 296 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 NUMBP49757 651 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 HMGCS2P54868 508 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 GABPB1Q06547 395 aaPredicted RBP3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 SNX1Q13596 522 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 MS4A13Q5J8X5 152 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 LDLRAP1Q5SW96 308 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 RNLSQ5VYX0 342 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 OLFM4Q6UX06 510 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 LYG1Q8N1E2 194 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 ARL14Q8N4G2 192 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 TBCKQ8TEA7 893 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 APOL2Q9BQE5 337 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 NACA2Q9H009 215 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 ATG10Q9H0Y0 220 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 GPR83Q9NYM4 423 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 RALGAPA1Q6GYQ0 2036 aa3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 COL2A1P02458 1487 aaPredicted RBP3.92□□□□□ -1.78
HMGCS1-207ENST00000514610 LRIT2A6NDA9 550 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 TRABD2BA6NFA1 517 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 TYROBPO43914 113 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 PRPSAP2O60256 369 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 IGSF6O95976 241 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 GSTA1P08263 222 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 HOXB7P09629 217 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 CCNA2P20248 432 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 IL10P22301 178 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 RUNX3Q13761 415 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 SMC1AQ14683 1233 aaKnown RBP3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 CEBPEQ15744 281 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 CNPY1Q3B7I2 92 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC25A30Q5SVS4 291 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 ZNF600Q6ZNG1 722 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 MARCH9Q86YJ5 346 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 CCDC36Q8IYA8 594 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 CNNM3Q8NE01 707 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 OR52J3Q8NH60 311 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 U2AF1L4Q8WU68 220 aaKnown RBP3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 TRIM9Q9C026 710 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 C1orf21Q9H246 121 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 FAM114A2Q9NRY5 505 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 RAI14Q9P0K7 980 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 BCAP29Q9UHQ4 241 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 ODF2LQ9ULJ1 636 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 RNF115Q9Y4L5 304 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 FKBP7Q9Y680 259 aa3.91□□□□□ -1.78
HMGCS1-207ENST00000514610 TRIM49BA6NDI0 452 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 MFSD2BA6NFX1 497 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 CCT8L1PA6NM43 557 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 SSX5O60225 188 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 STAM2O75886 525 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 RALAP11233 206 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 MAPK3P27361 379 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PTPN6P29350 595 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 SPP2Q13103 211 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PPP1R3AQ16821 1122 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 Q1RN00 199 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PARP6Q2NL67 630 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PRR5LQ6MZQ0 368 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PNCKQ6P2M8 343 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PAQR9Q6ZVX9 377 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 SERINC5Q86VE9 423 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 FNDC8Q8TC99 324 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 MCHR2Q969V1 340 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC25A36Q96CQ1 311 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 C11orf24Q96F05 449 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 C14orf79Q96F83 325 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 ZBED6CLQ96FA7 236 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 TSPAN18Q96SJ8 248 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 NMNAT2Q9BZQ4 307 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 KRT23Q9C075 422 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 ROPN1Q9HAT0 212 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 CUTCQ9NTM9 273 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 PRODH2Q9UF12 536 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 ZNF107Q9UII5 783 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 ZNF490Q9ULM2 529 aaPredicted RBP3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 CLCA3PQ9Y6N3 262 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 NOTCH3Q9UM47 2321 aa3.9□□□□□ -1.79
HMGCS1-207ENST00000514610 ABCA7Q8IZY2 2146 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 RNF222A6NCQ9 220 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 ZSCAN5CA6NGD5 496 aaPredicted RBP3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 RHBDL1O75783 438 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 PVRP15151 417 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 IGFBP5P24593 272 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 CHRNA3P32297 505 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms