RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 BLACEA4D250 179 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 FAAHO00519 579 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 NSA2O95478 260 aaKnown RBP13.97□□□□□ -0.17
VCAN-211ENST00000513984 RNH1P13489 461 aaKnown RBP13.97□□□□□ -0.17
VCAN-211ENST00000513984 NT5EP21589 574 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 PDX1P52945 283 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 HPCAP84074 193 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 DUSP5Q16690 384 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ZBED5Q49AG3 693 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 TCTE1Q5JU00 501 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ZCCHC12Q6PEW1 402 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 FRRS1Q6ZNA5 592 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 KCTD8Q6ZWB6 473 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 GPR141Q7Z602 305 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 B3GNT8Q7Z7M8 397 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 CARFQ8N187 725 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ARHGDIGQ99819 225 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
VCAN-211ENST00000513984 PIGUQ9H490 435 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 PDE7BQ9NP56 450 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 TMCC3Q9ULS5 477 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 COMMD3-BMI1R4GMX3 469 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 USP34Q70CQ2 3546 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 FITM1A5D6W6 292 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 H3BSA7 217 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ZBTB11O95625 1053 aaPredicted RBP13.97□□□□□ -0.17
VCAN-211ENST00000513984 ADAP00813 363 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 HTR1AP08908 422 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 SLC35E2P0CK97 266 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 GIMD1P0DJR0 217 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 JUNBP17275 347 aaPredicted RBP13.97□□□□□ -0.17
VCAN-211ENST00000513984 GSTT1P30711 240 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 PRKAR1BP31321 381 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 TTKP33981 857 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 GGT2P36268 569 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 FNTBP49356 437 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 PROX2Q3B8N5 592 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ZNF311Q5JNZ3 666 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 FGD3Q5JSP0 725 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 DCST1Q5T197 706 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 MLIPQ5VWP3 458 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 DHRS4L2Q6PKH6 230 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 SLC25A45Q8N413 288 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 CDRT4Q8N9R6 151 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 AQP11Q8NBQ7 271 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 OR6C4Q8NGE1 309 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 OR6T1Q8NGN1 323 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 SLC9A6Q92581 669 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 PRRC1Q96M27 445 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 STACQ99469 402 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 POLR1BQ9H9Y6 1135 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ADAP2Q9NPF8 381 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 ENAMQ9NRM1 1142 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 DUSP22Q9NRW4 184 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
VCAN-211ENST00000513984 NUP210LQ5VU65 1888 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 A0A1W2PRQ8 180 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 HYKKA2RU49 373 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 CCDC160A6NGH7 325 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 UGT2B17O75795 530 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 CT62P0C5K7 136 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 ALDH4A1P30038 563 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 MAP3K8P41279 467 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 PPM1FP49593 454 aaPredicted RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 EMP3P54852 163 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 IGLV3-21P80748 117 aaPredicted RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 BNIP3Q12983 259 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 PMS2P3Q13401 168 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 DGCR6Q14129 220 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 NR1D2Q14995 579 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 SEC23BQ15437 767 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 NPTX1Q15818 432 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 NKAIN2Q5VXU1 208 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 CWF19L1Q69YN2 538 aaKnown RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 LAIR1Q6GTX8 287 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 TSSK4Q6SA08 328 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 HMGN2P46Q86SG4 172 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 ENTHD1Q8IYW4 607 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 BPIFB6Q8NFQ5 453 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 SGCDQ92629 289 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 ZG16BQ96DA0 208 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 TUBA1CQ9BQE3 449 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 TRIM45Q9H8W5 580 aaPredicted RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 PAK1IP1Q9NWT1 392 aaPredicted RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 HCN3Q9P1Z3 774 aa13.96□□□□□ -0.17
VCAN-211ENST00000513984 MRPS33Q9Y291 106 aaKnown RBP13.96□□□□□ -0.17
VCAN-211ENST00000513984 HRO43593 1189 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 PCDHGA12O60330 932 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 FCMRO60667 390 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 GASTP01350 101 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 ALOX5P09917 674 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 GLB1P16278 677 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 GPR3P46089 330 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 OR1D5P58170 312 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 MAP4K2Q12851 820 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 PIN1Q13526 163 aaPredicted RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 RAB39AQ14964 217 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms