RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NR1H4Q96RI1 486 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-209ENST00000511426 PINK1Q9BXM7 581 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 RBCK1Q9BYM8 510 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF350Q9GZX5 532 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SLC38A1Q9H2H9 487 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 RUBCNLQ9H714 662 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 MTHFD2LQ9H903 347 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-209ENST00000511426 TMEM9BQ9NQ34 198 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 FBXO8Q9NRD0 319 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 NDUFAF4Q9P032 175 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SLC9A8Q9Y2E8 581 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 FAM32AQ9Y421 112 aaKnown RBP14.19□□□□□ -0.14
SCLT1-209ENST00000511426 MAU2Q9Y6X3 613 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 SCN3AQ9NY46 2000 aa14.19□□□□□ -0.14
SCLT1-209ENST00000511426 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 TCRBV16S1A1N1A0A5B0 115 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 A8MVJ9 347 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 TGFBR3LH3BV60 316 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 CDX4O14627 284 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 H6PDO95479 791 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 ALBP02768 609 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 OPN1SWP03999 348 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 THBS1P07996 1170 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 CHRM4P08173 479 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 PRKAR1BP31321 381 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 DCTP40126 519 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 DCDP81605 110 aaKnown RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 RHAGQ02094 409 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 DAG1Q14118 895 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 DUSP5Q16690 384 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 ZSWIM7Q19AV6 140 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 DHRS4L2Q6PKH6 230 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 RBM44Q6ZP01 1051 aaKnown RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 NAXDQ8IW45 347 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 GALNT4Q8N4A0 578 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 METTL27Q8N6F8 245 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 RCBTB1Q8NDN9 531 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 OR52R1Q8NGF1 315 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 APOBEC4Q8WW27 367 aaKnown RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 SLC9A6Q92581 669 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 SLC35A4Q96G79 324 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 FBXL20Q96IG2 436 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 SLC29A1Q99808 456 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 SAP130Q9H0E3 1048 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 SMPD3Q9NY59 655 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 HEMK1Q9Y5R4 338 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-209ENST00000511426 ENPP4Q9Y6X5 453 aa14.18□□□□□ -0.14
SCLT1-209ENST00000511426 B4E171 279 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 EI24O14681 340 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CPNE3O75131 537 aaKnown RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 STX11O75558 287 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CDC123O75794 336 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ALPPP05187 535 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CT62P0C5K7 136 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ACP2P11117 423 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CDK4P11802 303 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CD59P13987 128 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 PTGER1P34995 402 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 TSPAN7P41732 249 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 BTG2P78543 158 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 PPP2R2BQ00005 443 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 MC2RQ01718 297 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 OCA2Q04671 838 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 NRF1Q16656 503 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 DUSP7Q16829 419 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 NKAIN1Q4KMZ8 207 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 RPS26P11Q5JNZ5 115 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CYP4Z1Q86W10 505 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 MARVELD2Q8N4S9 558 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 COX18Q8N8Q8 333 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 DAZLQ92904 295 aaKnown RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF570Q96NI8 536 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CMKLR1Q99788 373 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 EDEM2Q9BV94 578 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 YIPF2Q9BWQ6 316 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 SLC26A1Q9H2B4 701 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 NECTIN3Q9NQS3 549 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 KLHL28Q9NXS3 571 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 C3orf18Q9UK00 162 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ABCG2Q9UNQ0 655 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF232Q9UNY5 417 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 WDR45Q9Y484 360 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 PCDHGA1Q9Y5H4 931 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 AP4B1Q9Y6B7 739 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 SDK1Q7Z5N4 2213 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 FAM86C2PA6NEL3 165 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 POLR1CO15160 346 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 IFNA16P05015 189 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ALPLP05186 524 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 PABPC4LP0CB38 370 aaKnown RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 MAOAP21397 527 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 EMDP50402 254 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 SMIM11AP58511 58 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 POU6F2P78424 691 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 ZNF155Q12901 538 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-209ENST00000511426 DUSP8Q13202 625 aa14.17□□□□□ -0.14
SCLT1-209ENST00000511426 CSRP2Q16527 193 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms