RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 EXOSC6Q5RKV6 272 aaKnown RBP16.09■□□□□ 0.17
MBD4-207ENST00000509587 SLC25A25Q6KCM7 469 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 NPSR1Q6W5P4 371 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 MDGA2Q7Z553 956 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 ANKRD46Q86W74 232 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 FUNDC1Q8IVP5 155 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 DND1Q8IYX4 353 aaKnown RBP16.09■□□□□ 0.17
MBD4-207ENST00000509587 NUP43Q8NFH3 380 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 SPACA9Q96E40 222 aaPredicted RBP16.09■□□□□ 0.17
MBD4-207ENST00000509587 SGCZQ96LD1 299 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 CCDC115Q96NT0 180 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 MS4A4EQ96PG1 132 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 OR52E6Q96RD3 313 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 LMF2Q9BU23 707 aaKnown RBP16.09■□□□□ 0.17
MBD4-207ENST00000509587 HES7Q9BYE0 225 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 SH2D2AQ9NP31 389 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 MAP10Q9P2G4 905 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 TRIM33Q9UPN9 1127 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 NPFFR2Q9Y5X5 522 aa16.09■□□□□ 0.17
MBD4-207ENST00000509587 FAM234BA2RU67 622 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 CFLARO15519 480 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 ABCB1P08183 1280 aaPredicted RBP16.08■□□□□ 0.16
MBD4-207ENST00000509587 NAGAP17050 411 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 CCT3P49368 545 aaKnown RBP16.08■□□□□ 0.16
MBD4-207ENST00000509587 SEC24CP53992 1094 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 PRKAG1P54619 331 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 NRG3P56975 720 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 PSPHP78330 225 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 PRR5P85299 388 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 LRRC74AQ0VAA2 488 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 ZNF155Q12901 538 aaPredicted RBP16.08■□□□□ 0.16
MBD4-207ENST00000509587 SQLEQ14534 574 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 NTRK2Q16620 822 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 RTL4Q6ZR62 310 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 GOLM1Q8NBJ4 401 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 GOT1L1Q8NHS2 421 aaPredicted RBP16.08■□□□□ 0.16
MBD4-207ENST00000509587 SFXN5Q8TD22 340 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 TMEM125Q96AQ2 219 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 MOAP1Q96BY2 351 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 C5orf34Q96MH7 638 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 SERHLQ9NQF3 203 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 ZCCHC3Q9NUD5 404 aaKnown RBP16.08■□□□□ 0.16
MBD4-207ENST00000509587 PCDHGB4Q9UN71 923 aa16.08■□□□□ 0.16
MBD4-207ENST00000509587 TTC36A6NLP5 189 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 NME2P1O60361 137 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 HMGN2P05204 90 aaKnown RBP16.07■□□□□ 0.16
MBD4-207ENST00000509587 NCF2P19878 526 aaPredicted RBP16.07■□□□□ 0.16
MBD4-207ENST00000509587 NME2P22392 152 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.16
MBD4-207ENST00000509587 RCAN2Q14206 197 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 MFSD12Q6NUT3 480 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 ZCCHC12Q6PEW1 402 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 BLOC1S3Q6QNY0 202 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 WDR53Q7Z5U6 358 aaPredicted RBP16.07■□□□□ 0.16
MBD4-207ENST00000509587 SLC44A2Q8IWA5 706 aaPredicted RBP16.07■□□□□ 0.16
MBD4-207ENST00000509587 PRR22Q8IZ63 422 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 CDRT4Q8N9R6 151 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 TMEM178AQ8NBL3 297 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 PSD4Q8NDX1 1056 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 OR56A1Q8NGH5 318 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 OR4A15Q8NGL6 344 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 C16orf58Q96GQ5 468 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 TIMMDC1Q9NPL8 285 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 SLC52A3Q9NQ40 469 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 EQTNQ9NQ60 294 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 KLHL1Q9NR64 748 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 GPATCH2Q9NW75 528 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
MBD4-207ENST00000509587 SPTA1P02549 2419 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CNTRLQ7Z7A1 2325 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CAPN14A8MX76 684 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 PPM1BO75688 479 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CPSF4O95639 269 aaKnown RBP16.06■□□□□ 0.16
MBD4-207ENST00000509587 CD1EP15812 388 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 FBXW4P57775 412 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 GNGT1P63211 74 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 C19orf57Q0VDD7 668 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 GAB1Q13480 694 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 ZNHIT3Q15649 155 aaPredicted RBP16.06■□□□□ 0.16
MBD4-207ENST00000509587 INAQ16352 499 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 MAPKAPK3Q16644 382 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 SPDYE7PQ495Y7 208 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CYP27C1Q4G0S4 372 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 MSANTD1Q6ZTZ1 278 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 SZRD1Q7Z422 152 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 GALNTL5Q7Z4T8 443 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 SLC34A3Q8N130 599 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CPSF7Q8N684 471 aaKnown RBP16.06■□□□□ 0.16
MBD4-207ENST00000509587 OR10G3Q8NGC4 313 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 OR4N2Q8NGD1 307 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 PAQR8Q8TEZ7 354 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 C10orf82Q8WW14 230 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 VPS33AQ96AX1 596 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 OMA1Q96E52 524 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 INPP5KQ9BT40 448 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 EPN3Q9H201 632 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
MBD4-207ENST00000509587 CCDC167Q9P0B6 97 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms