RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OXTRP30559 389 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GPR1P46091 355 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GZMKP49863 264 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 VSX2P58304 361 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TPI1P60174 286 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 RPL23AP62750 156 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SP2Q02086 613 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TNP2Q05952 138 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SULT2A1Q06520 285 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM71Q2Q1W2 868 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PODNL1Q6PEZ8 512 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 Q6ZN92 141 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PGAM4Q8N0Y7 254 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GPD1LQ8N335 351 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 OR2D3Q8NGH3 330 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PPTC7Q8NI37 304 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CXorf40AQ8TE69 158 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DNAJC9Q8WXX5 260 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ABTB1Q969K4 478 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 AP1S3Q96PC3 154 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DEFB118Q96PH6 123 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TRABDQ9H4I3 376 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ANKZF1Q9H8Y5 726 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MRM3Q9HC36 420 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GKN1Q9NS71 199 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF319Q9P2F9 582 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ABCD2Q9UBJ2 740 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 Q9UFV3 132 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ENPP5Q9UJA9 477 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SPIN1Q9Y657 262 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC30A1Q9Y6M5 507 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SHISA3A0PJX4 238 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 H3BMH7 237 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SNX3O60493 162 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ATF2P15336 505 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HOXB9P17482 250 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UQCRC2P22695 453 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 WARSP23381 471 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 STK19P49842 368 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LOXL3P58215 753 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LSM11P83369 360 aaKnown RBP eCLIP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UBXN2BQ14CS0 331 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ASTE1Q2TB18 679 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 KCTD11Q693B1 232 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PRSS45Q7RTY3 260 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF571Q7Z3V5 609 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 WDR5BQ86VZ2 330 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MMP21Q8N119 569 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SH3RF2Q8TEC5 729 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SPRYD4Q8WW59 207 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PERPQ96FX8 193 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 C9orf16Q9BUW7 83 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 DSN1Q9H410 356 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SUGCTQ9HAC7 445 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SDHAF2Q9NX18 166 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RIPK3Q9Y572 518 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 IGKV6-21A0A0C4DH24 114 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CXorf65A6NEN9 183 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OR2AG2A6NM03 316 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF716A6NP11 495 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 H3BNH8 94 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TGFB1I1O43294 461 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC28A2O43868 658 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CSO75390 466 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ANXA9O76027 345 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SORBS2O94875 1100 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 FARS2O95363 451 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF735P0CB33 412 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC2A2P11168 524 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MAGEA11P43364 429 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SEC61GP60059 68 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OLIG2Q13516 323 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ALKBH6Q3KRA9 238 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF789Q5FWF6 425 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CD276Q5ZPR3 534 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 FAM124AQ86V42 546 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OR5T2Q8NGG2 359 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CREB3L4Q8TEY5 395 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 BORCS5Q969J3 196 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SCRN2Q96FV2 425 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF514Q96K75 400 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MRGPRX1Q96LB2 322 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM8AQ9HCN3 771 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LSM5Q9Y4Y9 91 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TSC2P49815 1807 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 A0A087WWV3 80 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC35F4A4IF30 521 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PDHXO00330 501 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TIMM8AO60220 97 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HUS1O60921 280 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CCNE2O96020 404 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 VSIG10L2P0DP72 767 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RBMS1P29558 406 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PHBP35232 272 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CBX5P45973 191 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 DUSP3P51452 185 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CNN1P51911 297 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms