RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 OMA1Q96E52 524 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 ZC3HAV1LQ96H79 300 aaKnown RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 MS4A14Q96JA4 679 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PBKQ96KB5 322 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 REG4Q9BYZ8 158 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 OPN3Q9H1Y3 402 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PRM3Q9NNZ6 103 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 NSMCE4AQ9NXX6 385 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PSD3Q9NYI0 1048 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 MOCS1Q9NZB8 636 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CD274Q9NZQ7 290 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 KLRF1Q9NZS2 232 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 SNX12Q9UMY4 172 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 CFL2Q9Y281 166 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 FREM1Q5H8C1 2179 aa8.48□□□□□ -1.05
NEDD9-211ENST00000508546 A0A1W2PS29 197 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 C2orf72A6NCS6 295 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 PRAMEF25A6NGN4 478 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 SLC22A20A6NK97 555 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 K7EPI3 171 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 HS3ST1O14792 307 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 PGRMC2O15173 223 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 KLF4O43474 513 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 UGT2B11O75310 529 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 CCDC166P0CW27 439 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 PPP3CBP16298 524 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 TBXA2RP21731 343 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 IVDP26440 423 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 KCNJ5P48544 419 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 NR1H2P55055 460 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 SRSF2Q01130 221 aaKnown RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 HMGCS1Q01581 520 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 CUL3Q13618 768 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 DDX39BQ13838 428 aaKnown RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 VEZF1Q14119 521 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 MORF4L2Q15014 288 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 WHAMMP3Q1A5X7 153 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 CLEC12BQ2HXU8 276 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 HP1BP3Q5SSJ5 553 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 C6orf163Q5TEZ5 329 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 CHMP1BQ7LBR1 199 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 SPATA6LQ8N4H0 392 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 GBP7Q8N8V2 638 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 MAPK1IP1LQ8NDC0 245 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 OR4K14Q8NGD5 310 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 RDH11Q8TC12 318 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 UBTD2Q8WUN7 234 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 TSPAN17Q96FV3 270 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF845Q96IR2 970 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 LCORQ96JN0 433 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 SFXN2Q96NB2 322 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 MTERF1Q99551 399 aaKnown RBP8.47□□□□□ -1.05
NEDD9-211ENST00000508546 TMEM204Q9BSN7 226 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 HEY2Q9UBP5 337 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 ASIC3Q9UHC3 531 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 DTX4Q9Y2E6 619 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 SAR1BQ9Y6B6 198 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 PLCE1Q9P212 2302 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 NOTCH1P46531 2555 aa8.47□□□□□ -1.05
NEDD9-211ENST00000508546 A0A087X1B8 175 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 OVOL3O00110 214 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 PGRMC1O00264 195 aaKnown RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 TO15178 435 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 ZIC3O60481 467 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 TNFRSF21O75509 655 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 S100BP04271 92 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 THBDP07204 575 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 PEPDP12955 493 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 CPMP14384 443 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 PORP16435 677 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 CNTFP26441 200 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 XKP51811 444 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 B3GALT5-AS1P59052 145 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 RPS4XP62701 263 aaKnown RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 PHEXP78562 749 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 CKAP4Q07065 602 aaKnown RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 PLCXD2Q0VAA5 305 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 MAP4K2Q12851 820 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 GUSBP1Q15486 140 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 NNATQ16517 81 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 CHRFAM7AQ494W8 412 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 LIPJQ5W064 366 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 CEP112Q8N8E3 955 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF610Q8N9Z0 462 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 REPS1Q96D71 796 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 TMCO6Q96DC7 493 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 TRMT61AQ96FX7 289 aaKnown RBP8.46□□□□□ -1.06
NEDD9-211ENST00000508546 UBXN10Q96LJ8 280 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 RNF122Q9H9V4 155 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 NUDT4Q9NZJ9 180 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 OPTCQ9UBM4 332 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF639Q9UID6 485 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 FBXL2Q9UKC9 423 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.06
NEDD9-211ENST00000508546 GOLGA6L10A0A0M3HER8 536 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 A8MV72 311 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms