RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FGFRL1Q8N441 504 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 CERS5Q8N5B7 392 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 BCORP1Q8N888 145 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 OR52B4Q8NGK2 314 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 CCDC110Q8TBZ0 833 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 GIPC3Q8TF64 312 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 FAM222BQ8WU58 562 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 TAF4BQ92750 862 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 TBC1D31Q96DN5 1066 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 TRIM9Q9C026 710 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 RWDD1Q9H446 243 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 VAT1LQ9HCJ6 419 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ESM1Q9NQ30 184 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 FAM114A2Q9NRY5 505 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 CENPMQ9NSP4 180 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 HPF1Q9NWY4 346 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 RCOR3Q9P2K3 495 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ATXN10Q9UBB4 475 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 P2RX2Q9UBL9 471 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 MGAT4BQ9UQ53 548 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 RNF24Q9Y225 148 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 DHRS7Q9Y394 339 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ATP8B3O60423 1300 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 FAM230AA0A1W2PPH8 454 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 RGSL1A5PLK6 1076 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 MFSD2BA6NFX1 497 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ANKRD30BLA7E2S9 258 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ZNF487B1APH4 448 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 H3BMH7 237 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 PDXKO00764 312 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TYROBPO43914 113 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TOM1L1O75674 476 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 AKR7A3O95154 331 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 HPP00738 406 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 PTMAP06454 111 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 GATA1P15976 413 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TSPAN8P19075 237 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 RPL34P49207 117 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 GPC3P51654 580 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 MRPS6P82932 125 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ZNF85Q03923 595 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 EIF2B1Q14232 305 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 HIGD2BQ4VC39 106 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 BEND6Q5SZJ8 279 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 PRR5LQ6MZQ0 368 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ADAMTSL5Q6ZMM2 481 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TSEN54Q7Z6J9 526 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 HIPK1Q86Z02 1210 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ARFGAP2Q8N6H7 521 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 SUMF1Q8NBK3 374 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TBCKQ8TEA7 893 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 CRYGNQ8WXF5 182 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 PINX1Q96BK5 328 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 SLC25A36Q96CQ1 311 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 RPP25Q9BUL9 199 aaKnown RBP3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ECT2Q9H8V3 914 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 ACTR8Q9H981 624 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 POLE3Q9NRF9 147 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 KLRF1Q9NZS2 232 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 RAI14Q9P0K7 980 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 MBD2Q9UBB5 411 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 GHRLQ9UBU3 117 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 CSAG2Q9Y5P2 127 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 MYH15Q9Y2K3 1946 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 CUX2O14529 1486 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 KIF26BQ2KJY2 2108 aa3.2□□□□□ -1.9
HMGB1P28-201ENST00000507778 TTC26A0AVF1 554 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 TRIM49BA6NDI0 452 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 C11orf98E9PRG8 122 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 F8WDY8 70 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 IMPA2O14732 288 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 LRRTM2O43300 516 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 SDC3O75056 442 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 VPS26AO75436 327 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 SCGB2A1O75556 95 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 TOXO94900 526 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 APBB3O95704 486 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 IGHG3P01860 377 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 FOLR2P14207 255 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 PPIAP62937 165 aaKnown RBP3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 HSF2Q03933 536 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 ZP4Q12836 540 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 PDZK1IP1Q13113 114 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 SCGB2A2Q13296 93 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 ADPRMQ3LIE5 342 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 SEL1L2Q5TEA6 688 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 DMKNQ6E0U4 476 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 LEG1Q6P5S2 330 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 GET4Q7L5D6 327 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 CATSPER4Q7RTX7 472 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 NET1Q7Z628 596 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 MISPQ8IVT2 679 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 SLC22A18ASQ8N1D0 253 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 OR6T1Q8NGN1 323 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 MCHR2Q969V1 340 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 WBP1Q96G27 269 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 FICDQ9BVA6 458 aa3.19□□□□□ -1.9
HMGB1P28-201ENST00000507778 CARD6Q9BX69 1037 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms