RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PAGE3Q5JUK9 113 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 LRIF1Q5T3J3 769 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 HLA-DQA1Q5Y7H0 255 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 MFSD12Q6NUT3 480 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 NPSR1Q6W5P4 371 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 LSM14AQ8ND56 463 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 OR56A1Q8NGH5 318 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 OR5AK3PQ8NH89 298 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 C9orf43Q8TAL5 461 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 HSPBAP1Q96EW2 488 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 UBL7Q96S82 380 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 SLC6A13Q9NSD5 602 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 GIN1Q9NXP7 522 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 ARMCX1Q9P291 453 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 ABI3Q9P2A4 366 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 BAHCC1Q9P281 2608 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 RNF103-CHMP3A0A140T963 221 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ACOX3O15254 700 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 NKX2-2O95096 273 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 GSNP06396 782 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CD96P40200 585 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CD97P48960 835 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 MAN2A2P49641 1150 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 PRIM2P49643 509 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 HLCSP50747 726 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CORO7P57737 925 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 PSPHP78330 225 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF155Q12901 538 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-210ENST00000506767 TUBA3CQ13748 450 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 SPDYE7PQ495Y7 208 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 LACTB2Q53H82 288 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-210ENST00000506767 GKAP1Q5VSY0 366 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-210ENST00000506767 SAXO2Q658L1 398 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 TUBA3EQ6PEY2 450 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 BHLHB9Q6PI77 547 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF621Q6ZSS3 439 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ASB18Q6ZVZ8 466 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 C6orf120Q7Z4R8 191 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 MTERF4Q7Z6M4 381 aaKnown RBP11.86□□□□□ -0.51
TCOF1-210ENST00000506767 RETREG3Q86VR2 466 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF227Q86WZ6 799 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 GPALPP1Q8IXQ4 340 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CLEC4FQ8N1N0 589 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 DPP10Q8N608 796 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 TRIML2Q8N7C3 387 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CDRT4Q8N9R6 151 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 SLC22A8Q8TCC7 542 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 MIPOL1Q8TD10 442 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 ZFP90Q8TF47 636 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 TM9SF4Q92544 642 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 NEURL3Q96EH8 262 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 C16orf58Q96GQ5 468 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 SLC35A5Q9BS91 424 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 SLC25A18Q9H1K4 315 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 PLA2G3Q9NZ20 509 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 LEF1Q9UJU2 399 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-210ENST00000506767 VPS4AQ9UN37 437 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 NPFFR2Q9Y5X5 522 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 CAPN7Q9Y6W3 813 aa11.86□□□□□ -0.51
TCOF1-210ENST00000506767 A0A096LPI6 279 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 TRBV5-3A0A0A0MS03 114 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 OR5H15A6NDH6 313 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 CAPN14A8MX76 684 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 FBP2O00757 339 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ATXN7O15265 892 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 DPM1O60762 260 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 NEURL1O76050 574 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 OR6B1O95007 311 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 C1QCP02747 245 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 FBXO45P0C2W1 286 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ACP2P11117 423 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 NAGAP17050 411 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 SOAT1P35610 550 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 SOX3P41225 446 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ST13P50502 369 aaKnown RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 TP53BP2Q13625 1128 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 LY6DQ14210 128 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 LASP1Q14847 261 aaKnown RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 MAPRE2Q15555 327 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ZNHIT3Q15649 155 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF791Q3KP31 576 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 GTDC1Q4AE62 458 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 COQ5Q5HYK3 327 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 C6orf10Q5SRN2 563 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 OPN5Q6U736 354 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 DLEU7Q6UYE1 221 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 Q6ZS92 163 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-210ENST00000506767 TREML1Q86YW5 311 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 MSRB3Q8IXL7 192 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 TAGAPQ8N103 731 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 ZADH2Q8N4Q0 377 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 TMEM156Q8N614 296 aa11.85□□□□□ -0.51
TCOF1-210ENST00000506767 RBMXL3Q8N7X1 1067 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms