RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 GARNL3Q5VVW2 1013 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CARFQ8N187 725 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR4D11Q8NGI4 311 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SGCDQ92629 289 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 KAT2AQ92830 837 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CRELD1Q96HD1 420 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SPACA7Q96KW9 195 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CSF3RQ99062 836 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 FUNDC2Q9BWH2 189 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 RHCGQ9UBD6 479 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 EPHA6Q9UF33 1036 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 MRPS33Q9Y291 106 aaKnown RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 TLR4O00206 839 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CDK1P06493 297 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ALOX5P09917 674 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 PVRP15151 417 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 EPHA4P54764 986 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 HNRNPKP61978 463 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ST3GAL3Q11203 375 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 UBXN2BQ14CS0 331 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 TRAM2Q15035 370 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 PRTGQ2VWP7 1150 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF542PQ5EBM4 170 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 C17orf82Q86X59 251 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CROCCP3Q8IVE0 287 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SPEM1Q8N4L4 309 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC35A4Q96G79 324 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 CD180Q99467 661 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 RAB33BQ9H082 229 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 EQTNQ9NQ60 294 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF226Q9NYT6 803 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 REV1Q9UBZ9 1251 aa16.18■□□□□ 0.18
TRAPPC11-204ENST00000505676 HYKKA2RU49 373 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 M0R3H8 397 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 SEMA7AO75326 666 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 BCL10O95999 233 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 ALDH4A1P30038 563 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 VSX2P58304 361 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 DUSP8Q13202 625 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 FZD5Q13467 585 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 GAS6Q14393 721 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 INAVAQ3KP66 663 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 TMEM201Q5SNT2 666 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 LAIR1Q6GTX8 287 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 C1orf94Q6P1W5 598 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 C7orf57Q8NEG2 295 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR6T1Q8NGN1 323 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC7A13Q8TCU3 470 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 COL26A1Q96A83 441 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 TPSD1Q9BZJ3 242 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 KRCC1Q9NPI7 259 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 FBXL21Q9UKT6 434 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 PROS1P07225 676 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 EMP3P54852 163 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 TAS2R41P59536 307 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 OLR1P78380 273 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 CHRNEQ04844 493 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 BIKQ13323 160 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 C1orf61Q13536 156 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 DCTN2Q13561 401 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 FAM53BQ14153 422 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 C12orf73Q69YU5 71 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 FAM111BQ6SJ93 734 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 PTCHD4Q6ZW05 846 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 LACC1Q8IV20 430 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 MCATQ8IVS2 390 aaKnown RBP16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 ARL14Q8N4G2 192 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 RSPO3Q9BXY4 272 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 PRRG3Q9BZD7 231 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 SAP130Q9H0E3 1048 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 RACGAP1Q9H0H5 632 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 WDR45Q9Y484 360 aa16.17■□□□□ 0.18
TRAPPC11-204ENST00000505676 BRWD1Q9NSI6 2320 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 FAM170BA6NMN3 283 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 AP3D1O14617 1153 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 INMTO95050 263 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR5F1O95221 314 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 ST6GAL1P15907 406 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 PIGFQ07326 219 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 TARDBPQ13148 414 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■□□□ 12.3
TRAPPC11-204ENST00000505676 SEC23BQ15437 767 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZSWIM7Q19AV6 140 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 ENTPD8Q5MY95 495 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 SLC25A30Q5SVS4 291 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 MEDAGQ5VYS4 303 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 PODNL1Q6PEZ8 512 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 CASP12Q6UXS9 341 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 FRRS1Q6ZNA5 592 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 ARHGEF39Q8N4T4 335 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 OR8J1Q8NGP2 316 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 GNPDA2Q8TDQ7 276 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 YIPF6Q96EC8 236 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 OTUB1Q96FW1 271 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 ZNF285Q96NJ3 590 aa16.16■□□□□ 0.18
TRAPPC11-204ENST00000505676 IER2Q9BTL4 223 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms