RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 MACROD1Q9BQ69 325 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 FNDC11Q9BVV2 318 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 FAIM2Q9BWQ8 316 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 RNF32Q9H0A6 362 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 PRDM9Q9NQV7 894 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 TDP1Q9NUW8 608 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 MRPL39Q9NYK5 338 aaKnown RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SRRDQ9UH36 339 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ELF5Q9UKW6 265 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 DICER1Q9UPY3 1922 aaKnown RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 DOCK4Q8N1I0 1966 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ANKRD36A6QL64 1941 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 H0YC42 278 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SLC43A1O75387 559 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 IFNA7P01567 189 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 GPR4P46093 362 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 MTNR1AP48039 350 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 GIPRP48546 466 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 CLCNKAP51800 687 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SIM1P81133 766 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ST3GAL2Q16842 350 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 PLK5Q496M5 336 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 PGBD2Q6P3X8 592 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 AGTRAPQ6RW13 159 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 RRM2BQ7LG56 351 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 MRPL10Q7Z7H8 261 aaKnown RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ZER1Q7Z7L7 766 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 RNF180Q86T96 592 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SIAH3Q8IW03 269 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 GPR32P1Q8NGA4 272 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 DNAJB8Q8NHS0 232 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 HSD17B8Q92506 261 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 WNT2BQ93097 391 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF707Q96C28 371 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SEC22CQ9BRL7 303 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 CXorf36Q9H7Y0 433 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 C1GALT1Q9NS00 363 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 THSD1Q9NS62 852 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 SLCO1C1Q9NYB5 712 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF282Q9UDV7 671 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-208ENST00000504387 FBXW2Q9UKT8 454 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 COPS3Q9UNS2 423 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 ANGPT4Q9Y264 503 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 CHST2Q9Y4C5 530 aa7.2□□□□□ -1.26
NEDD9-208ENST00000504387 OAZ2O95190 189 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 RECKO95980 971 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TBXA2RP21731 343 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 AHRP35869 848 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 NUP62P37198 522 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SPAM1P38567 509 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 AKR1C2P52895 323 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ACLYP53396 1101 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ATP12AP54707 1039 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 PTSQ03393 145 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 AKR1C1Q04828 323 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 PUDPQ08623 228 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 DSG2Q14126 1118 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SLC25A35Q3KQZ1 300 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SLC25A25Q6KCM7 469 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 FAM198BQ6UWH4 519 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 PGBD3Q8N328 593 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TOMM5Q8N4H5 51 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 RELL2Q8NC24 303 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 OR4D9Q8NGE8 314 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 MOSPD2Q8NHP6 518 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TBC1D20Q96BZ9 403 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SCRN2Q96FV2 425 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 FUBP3Q96I24 572 aaKnown RBP eCLIP7.19□□□□□ -1.261e-14■■■□□ 17.7
NEDD9-208ENST00000504387 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SFXN2Q96NB2 322 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 C2orf49Q9BVC5 232 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CCDC86Q9H6F5 360 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 HEXA-AS1Q9H8Q6 139 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM45AQ9NWC5 275 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ASCC3Q8N3C0 2202 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ARHGEF33A8MVX0 844 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 H3BNC9 293 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SOCS6O14544 535 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TOR1AO14656 332 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 MPZL2O60487 215 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 HCN1O60741 890 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 PPM1BO75688 479 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CBX7O95931 251 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TCRBP04435 133 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 HOXD4P09016 255 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 OR56A5P0C7T3 313 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 NR2F1P10589 423 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ACADMP11310 421 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 ITGB7P26010 798 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 NSG1P42857 185 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SLC6A11P48066 632 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 DGKGP49619 791 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CDH11P55287 796 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 WDR5P61964 334 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SLBPQ14493 270 aaKnown RBP eCLIP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms