RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MSX2P35548 267 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 EIF1P41567 113 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FASLGP48023 281 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 HERVK_113P63132 956 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SHC2P98077 582 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FOXK2Q01167 660 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RPA4Q13156 261 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RAPSNQ13702 412 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PLAG1Q6DJT9 500 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CES5AQ6NT32 575 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TPRA1Q86W33 373 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TNS4Q8IZW8 715 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SLC34A3Q8N130 599 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FBXO39Q8N4B4 442 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MEIOBQ8N635 442 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SIDT2Q8NBJ9 832 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PPP1R35Q8TAP8 253 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM163Q8TC26 289 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CXorf40AQ8TE69 158 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 DNAJB3Q8WWF6 145 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PSMG2Q969U7 264 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MFSD3Q96ES6 412 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 IGSF21Q96ID5 467 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MMP19Q99542 508 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ERVK-6Q9BXR3 956 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 DPY30Q9C005 99 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 C12orf49Q9H741 205 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MYOZ1Q9NP98 299 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 C1GALT1Q9NS00 363 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TAS2R13Q9NYV9 303 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CTSFQ9UBX1 484 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PADI2Q9Y2J8 665 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CMAHPQ9Y471 501 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NPTNQ9Y639 398 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 A0A0D9SG52 128 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM129A0AVI4 362 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 C22orf46C9J442 243 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NEDD8-MDP1E9PL57 170 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TSTD3H0UI37 97 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 STK25O00506 426 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CXCR6O00574 342 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TGM5O43548 720 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PRAMEF2O60811 474 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FGF19O95750 216 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PGK1P00558 417 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CHRNGP07510 517 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SLC35E2BP0CK96 405 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 IFNGR1P15260 489 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 EPCAMP16422 314 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MGAT1P26572 445 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 S100A11P31949 105 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PMELP40967 661 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RGS4P49798 205 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MAPK10P53779 464 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SPCS3P61009 180 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SRSF11Q05519 484 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 HYAL2Q12891 473 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 EXOSC2Q13868 293 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MPPED2Q15777 294 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CARTPTQ16568 116 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZRANB3Q5FWF4 1079 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NXNL2Q5VZ03 156 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 BSPRYQ5W0U4 402 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SAXO2Q658L1 398 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF57Q68EA5 555 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CERS6Q6ZMG9 384 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 COMTD1Q86VU5 262 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZFAND4Q86XD8 727 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 IGDCC3Q8IVU1 814 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FTMTQ8N4E7 242 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 DTWD1Q8N5C7 304 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MS4A15Q8N5U1 240 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 COMMD1Q8N668 190 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF548Q8NEK5 533 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 DNAJB14Q8TBM8 379 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 WDR20Q8TBZ3 569 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 IGSF8Q969P0 613 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RAB7BQ96AH8 199 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SLC41A3Q96GZ6 507 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 HS6ST2Q96MM7 605 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF382Q96SR6 550 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 LGMNQ99538 433 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NT5C1AQ9BXI3 368 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TEX101Q9BY14 249 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GABARAPL3Q9BY60 117 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GPR63Q9BZJ6 419 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ALX4Q9H161 411 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SAV1Q9H4B6 383 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PCIF1Q9H4Z3 704 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NIT2Q9NQR4 276 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZFP57Q9NU63 452 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NLKQ9UBE8 527 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SEC14L3Q9UDX4 400 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZDHHC2Q9UIJ5 367 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MRPS18CQ9Y3D5 142 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 BOLA1Q9Y3E2 137 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GPR45Q9Y5Y3 372 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MEIKINA0A087WXM9 373 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF840PA6NDX5 716 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FAM220BPB1ANY3 271 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms