RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PRIM2	P49643	509 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	PRKAG1	P54619	331 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC37A1	P57057	533 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	FLOT2	Q14254	428 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF630	Q2M218	657 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	AP1AR	Q63HQ0	302 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	GLYAT	Q6IB77	296 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	HEPHL1	Q6MZM0	1159 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	ANGPTL8	Q6UXH0	198 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	CCDC80	Q76M96	950 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SZRD1	Q7Z422	152 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	DHFR2	Q86XF0	187 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	PROSER1	Q86XN7	944 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	DTX1	Q86Y01	620 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	AQP12A	Q8IXF9	295 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	METTL25	Q8N6Q8	603 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	ENDOV	Q8N8Q3	282 aa	Known RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	GOLM1	Q8NBJ4	401 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC16A11	Q8NCK7	471 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	C11orf65	Q8NCR3	313 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	OR5D16	Q8NGK9	328 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	OR14A16	Q8NHC5	309 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC2A12	Q8TD20	617 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	JADE3	Q92613	823 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	DAZL	Q92904	295 aa	Known RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	RAB8B	Q92930	207 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	MAL2	Q969L2	176 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	DUS3L	Q96G46	650 aa	Known RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC35A4	Q96G79	324 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SENP5	Q96HI0	755 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	OR7D2	Q96RA2	312 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	STAC	Q99469	402 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	LMF2	Q9BU23	707 aa	Known RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	FOLH1B	Q9HBA9	442 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	GPN3	Q9UHW5	284 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	FAF1	Q9UNN5	650 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	KCNE3	Q9Y6H6	103 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	WDFY3	Q8IZQ1	3526 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	CCDC88C	Q9P219	2028 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	SAGE2P	A6NJ88	616 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394		A8MUA0	341 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	PCDH17	O14917	1159 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	BRINP1	O60477	761 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	PRAMEF2	O60811	474 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	ENTPD5	O75356	428 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CREG1	O75629	220 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SDHB	P21912	280 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	ANXA11	P50995	505 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CRYBA2	P53672	197 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	POLE2	P56282	527 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CDK6	Q00534	326 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	PSG6	Q00889	435 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SCARB2	Q14108	478 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	RTP5	Q14D33	572 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	DUSP5	Q16690	384 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SFT2D3	Q587I9	215 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	C6orf163	Q5TEZ5	329 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	FAM69B	Q5VUD6	431 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	FAAH2	Q6GMR7	532 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC30A8	Q8IWU4	369 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	NLGN4X	Q8N0W4	816 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF321P	Q8N8H1	164 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CDRT4	Q8N9R6	151 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	MORN4	Q8NDC4	146 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CHDH	Q8NE62	594 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	HIPK4	Q8NE63	616 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	C16orf52	Q8NHV5	167 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC38A5	Q8WUX1	472 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	ART5	Q96L15	291 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	YIPF4	Q9BSR8	244 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	CNPPD1	Q9BV87	410 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	SEMA4C	Q9C0C4	833 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	NRSN2	Q9GZP1	204 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	OR10A5	Q9H207	317 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	PIGU	Q9H490	435 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	EQTN	Q9NQ60	294 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	DUSP22	Q9NRW4	184 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	OLAH	Q9NV23	265 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	DTX4	Q9Y2E6	619 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	PTRH2	Q9Y3E5	179 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF451	Q9Y4E5	1061 aa		11.29	□□□□□ -0.6
MATR3-231	ENST00000502394	DCDC2B	A2VCK2	349 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TTC36	A6NLP5	189 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	DUXA	A6NLW8	204 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TMEM229A	B2RXF0	380 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	C21orf140	B9A014	251 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	STMND1	H3BQB6	276 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	ZIC2	O95409	532 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TNNI3	P19429	210 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TCN2	P20062	427 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	F8A1	P23610	371 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	KDELR2	P33947	212 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	SOX11	P35716	441 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	PGD	P52209	483 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	RHD	Q02161	417 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	RIPK1	Q13546	671 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms