RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ELOVL4Q9GZR5 314 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 TRPV6Q9H1D0 765 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 C2orf40Q9H1Z8 148 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 TMEM245Q9H330 911 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 KCNMB3Q9NPA1 279 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ESM1Q9NQ30 184 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 MIEF1Q9NQG6 463 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ZCCHC3Q9NUD5 404 aaKnown RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 FBXW2Q9UKT8 454 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 MTF2Q9Y483 593 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 FLVCR1Q9Y5Y0 555 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 TNRQ92752 1358 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 PTPRUQ92729 1446 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 IGLV8-61A0A075B6I0 122 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 PINLYPA6NC86 204 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 MFSD2BA6NFX1 497 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 GMNNO75496 209 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 STAM2O75886 525 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 ASNSP08243 561 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 TRIM23P36406 574 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 NSFP46459 744 aaKnown RBP2.32□□□□□ -2.04
SMC4-227ENST00000497984 KIAA1024LP59773 190 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 HAND2P61296 217 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 MECOMQ03112 1051 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 SERTAD2Q14140 314 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 RCN2Q14257 317 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 SGCBQ16585 318 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 SMU1Q2TAY7 513 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 GPAT3Q53EU6 434 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 ADAMTSL5Q6ZMM2 481 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 PYROXD2Q8N2H3 581 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 Q8N9L7 120 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 LPCAT1Q8NF37 534 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 CCDC26Q8TAB7 109 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 ACCSQ96QU6 501 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
SMC4-227ENST00000497984 MRPL9Q9BYD2 267 aaKnown RBP2.32□□□□□ -2.04
SMC4-227ENST00000497984 EXOSC3Q9NQT5 275 aaKnown RBP2.32□□□□□ -2.04
SMC4-227ENST00000497984 KLRF1Q9NZS2 232 aa2.32□□□□□ -2.04
SMC4-227ENST00000497984 PURGQ9UJV8 347 aaKnown RBP2.32□□□□□ -2.04
SMC4-227ENST00000497984 CDC42BPBQ9Y5S2 1711 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 CFLARO15519 480 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 BUB1O43683 1085 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 ZNF861PO60384 105 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 RTN2O75298 545 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 AKAP3O75969 853 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 IGHV1-2P23083 117 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 KRT83P78385 493 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 CCZ1BP86790 482 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 CCZ1P86791 482 aaPredicted RBP2.31□□□□□ -2.04
SMC4-227ENST00000497984 TSTA3Q13630 321 aaPredicted RBP2.31□□□□□ -2.04
SMC4-227ENST00000497984 SBK1Q52WX2 424 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 TCHHL1Q5QJ38 904 aaPredicted RBP2.31□□□□□ -2.04
SMC4-227ENST00000497984 LGSNQ5TDP6 509 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 ARMC3Q5W041 872 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 TFAP2EQ6VUC0 442 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 ZNF677Q86XU0 584 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 UNC5CLQ8IV45 518 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 CADM2Q8N3J6 435 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 TMCO5AQ8N6Q1 288 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 PSMA8Q8TAA3 256 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 LHX4Q969G2 390 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 IMMP1LQ96LU5 166 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 CTRCQ99895 268 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 STARD5Q9NSY2 213 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 AKAP7Q9P0M2 348 aaPredicted RBP2.31□□□□□ -2.04
SMC4-227ENST00000497984 PDE10AQ9Y233 779 aa2.31□□□□□ -2.04
SMC4-227ENST00000497984 TRBV7-9A0A0J9YWB2 115 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 NPIPA2E9PIF3 369 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 C11orf98E9PRG8 122 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 NME2P1O60361 137 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 RANBP6O60518 1105 aaKnown RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 TGDSO95455 350 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 ECDO95905 644 aaPredicted RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 IGLV1-47P01700 117 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 HSPB1P04792 205 aaKnown RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 GSTA1P08263 222 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 ALPIP09923 528 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 GHRP10912 638 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 NR2C1P13056 603 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 PSMB1P20618 241 aaKnown RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 CASP3P42574 277 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 TNNT3P45378 269 aaPredicted RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 SMSP52788 366 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 NPRL3Q12980 569 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 BNIP1Q12981 228 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 GLYR1Q49A26 553 aaPredicted RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 METTL11BQ5VVY1 283 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 OTPQ5XKR4 325 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 TMEM270Q6UE05 265 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 GPR65Q8IYL9 337 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 RFESDQ8TAC1 157 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 RNASE8Q8TDE3 154 aaKnown RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 DLX4Q92988 240 aaPredicted RBP2.3□□□□□ -2.04
SMC4-227ENST00000497984 C5orf30Q96GV9 206 aa2.3□□□□□ -2.04
SMC4-227ENST00000497984 TECTBQ96PL2 329 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms