RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 BDH2Q9BUT1 245 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRMT61BQ9BVS5 477 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 NFKBIZQ9BYH8 718 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PANK2Q9BZ23 570 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PUS3Q9BZE2 481 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CPVLQ9H3G5 476 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 VCPKMTQ9H867 229 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 EBF2Q9HAK2 575 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 GLRX2Q9NS18 164 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 FGF21Q9NSA1 209 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ASB6Q9NWX5 421 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 GDAP2Q9NXN4 497 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SMARCAL1Q9NZC9 954 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF224Q9NZL3 707 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 AIPL1Q9NZN9 384 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RAI14Q9P0K7 980 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PSORS1C1Q9UIG5 152 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 FBXL4Q9UKA2 621 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 MAN1B1Q9UKM7 699 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF490Q9ULM2 529 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PCDHA7Q9UN72 937 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PLA2G4CQ9UP65 541 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RUVBL2Q9Y230 463 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RNF115Q9Y4L5 304 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CNTRLQ7Z7A1 2325 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZGRF1Q86YA3 2104 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZFC3H1O60293 1989 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 A0A087X1B8 175 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 A0A0G2JPF8 293 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FAM240BA0A1B0GVZ2 78 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 A0A1W2PPI3 338 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 A0A1W2PRB8 838 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYBPHLA2RUH7 354 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MTMR11A4FU01 709 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF716A6NP11 495 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 HNRNPCL3B7ZW38 293 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF587BE7ETH6 402 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 H3BMM5 538 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SGK1O00141 431 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF264O43296 627 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 XPNPEP2O43895 674 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 WDR1O75083 606 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SNNO75324 88 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 GRAP2O75791 330 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 IGLV2-14P01704 120 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TFAP2AP05549 437 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 NUDT17P0C025 328 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF735P0CB33 412 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 HNRNPCL4P0DMR1 293 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CLUP10909 449 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CDK4P11802 303 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ODC1P11926 461 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 HOXB2P14652 356 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TNNI3P19429 210 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CA6P23280 308 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MARCKSP29966 332 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PRDX6P30041 224 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 AXLP30530 894 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 HOXD3P31249 432 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CD52P31358 61 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TAGLN2P37802 199 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 NR2C2P49116 596 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 THOP1P52888 689 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ELLP55199 621 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 KRTAP10-9P60411 292 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SEC61A1P61619 476 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ABATP80404 500 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 RPL24P83731 157 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYBPC1Q00872 1141 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PDE1BQ01064 536 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MGAT3Q09327 533 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRAP1Q12931 704 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRAF2Q12933 501 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TAF10Q12962 218 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZBTB17Q13105 803 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMED1Q13445 227 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 KIR2DS3Q14952 304 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR1C1Q15619 314 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF124Q15973 351 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PDK4Q16654 411 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SPATS1Q496A3 300 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TDRD12Q587J7 1177 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CEP78Q5JTW2 689 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 HES3Q5TGS1 186 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ERICH6BQ5W0A0 696 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CEACAM20Q6UY09 585 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF788Q6ZQV5 615 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TAS2R42Q7RTR8 314 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 LRRC70Q7Z2Q7 622 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FAM131BQ86XD5 332 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CBWD2Q8IUF1 395 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PALM2Q8IXS6 379 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CLIP4Q8N3C7 705 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 GBGT1Q8N5D6 347 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 LRRC17Q8N6Y2 441 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MAPKAPK5-AS1Q8N8E1 139 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRPV3Q8NET8 790 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR5AU1Q8NGC0 362 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 C8orf46Q8TAG6 207 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 OLIG1Q8TAK6 271 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms