RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	CDH3	P22223	829 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PSMA3	P25788	255 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CFP	P27918	469 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PRDX3	P30048	256 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	OTX2	P32243	289 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	MC5R	P33032	325 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CBS	P35520	551 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	GRIA3	P42263	894 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SKIV2L2	P42285	1042 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CENPA	P49450	140 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SELENOP	P49908	381 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	TDGF1P3	P51864	188 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	KCNK10	P57789	538 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	ADORA2A-AS1	P86434	159 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	MESD	Q14696	234 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	HSPB2	Q16082	182 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PCGF3	Q3KNV8	242 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FILIP1L	Q4L180	1135 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	TIGD2	Q4W5G0	525 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FBLN7	Q53RD9	439 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	LRIF1	Q5T3J3	769 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	KRT80	Q6KB66	452 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	HMBOX1	Q6NT76	420 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	RHBDD2	Q6NTF9	364 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SPESP1	Q6UW49	350 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	IGFL2	Q6UWQ7	119 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PIWIL3	Q7Z3Z3	882 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	MRGPRG	Q86SM5	289 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	RAB43	Q86YS6	212 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	MAP7D3	Q8IWC1	876 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PIANP	Q8IYJ0	282 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CCDC170	Q8IYT3	715 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FAM185A	Q8N0U4	392 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC25A41	Q8N5S1	370 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	OR2Y1	Q8NGV0	311 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	KIF18A	Q8NI77	898 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	GDAP1	Q8TB36	358 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PROKR1	Q8TCW9	393 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	BRSK1	Q8TDC3	778 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PPP4R1	Q8TF05	950 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	TFB1M	Q8WVM0	346 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FAR1	Q8WVX9	515 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	ANP32B	Q92688	251 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	KRT35	Q92764	455 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PTP4A1	Q93096	173 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	HAUS1	Q96CS2	278 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	C14orf79	Q96F83	325 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	DNAJC1	Q96KC8	554 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	BBS4	Q96RK4	519 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	C19orf43	Q9BQ61	176 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	WDR77	Q9BQA1	342 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FICD	Q9BVA6	458 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	TM2D2	Q9BX73	214 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CHRNA10	Q9GZZ6	450 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	NUAK2	Q9H093	628 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	NAT10	Q9H0A0	1025 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	XKR8	Q9H6D3	395 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SYTL2	Q9HCH5	934 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SYBU	Q9NX95	663 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	P4HTM	Q9NXG6	502 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	SPHK1	Q9NYA1	384 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	HACD3	Q9P035	362 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CTSF	Q9UBX1	484 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	OSGIN1	Q9UJX0	560 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	FBXL4	Q9UKA2	621 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	PADI2	Q9Y2J8	665 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	WBP11	Q9Y2W2	641 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CMAHP	Q9Y471	501 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	LSM4	Q9Y4Z0	139 aa	Known RBP	3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	HS3ST3B1	Q9Y662	390 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	CCDC88C	Q9P219	2028 aa		3.98	□□□□□ -1.77
VPS52-222	ENST00000495981	ZGRF1	Q86YA3	2104 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CACNA1C	Q13936	2221 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981		A0A1W2PQ72	361 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TTC36	A6NLP5	189 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	C2orf74	A8MZ97	194 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981		E7EQ34	232 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SOCS6	O14544	535 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC25A17	O43808	307 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CST8	O60676	142 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC25A12	O75746	678 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	BAG2	O95816	211 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	LY6G6D	O95868	133 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	AGT	P01019	485 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ALPP	P05187	535 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CHRM5	P08912	532 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	H2AFZ	P0C0S5	128 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	MMP9	P14780	707 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	NDUFB7	P17568	137 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SRD5A1	P18405	259 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	MSH3	P20585	1137 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	PSMB4	P28070	264 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	PDHA2	P29803	388 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	PKLR	P30613	574 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SHMT2	P34897	504 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TSFM	P43897	325 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	NPY4R	P50391	375 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms