RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TGM6O95932 706 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 ATP1B1P05026 303 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 GFAPP14136 432 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 ZNF708P17019 499 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 DEKP35659 375 aaKnown RBP15.9■□□□□ 0.14
TMEM53-209ENST00000495630 CPOXP36551 454 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 CD79BP40259 229 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 HMGCS1Q01581 520 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 NNATQ16517 81 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 FAM83EQ2M2I3 478 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 FAM111BQ6SJ93 734 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 C20orf204Q6ZNR8 217 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 CHMP1BQ7LBR1 199 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 PAGE2Q7Z2X7 111 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 GOLGA7Q7Z5G4 137 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 PPM1NQ8N819 430 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 LRRN4CLQ8ND94 238 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 TMCO6Q96DC7 493 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 PIK3IP1Q96FE7 263 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 SLC39A3Q9BRY0 314 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 LRRC1Q9BTT6 524 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 MED18Q9BUE0 208 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 ITPAQ9BY32 194 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 BRINP2Q9C0B6 783 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 KLHL28Q9NXS3 571 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 CES1P1Q9UKY3 287 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 PSME2Q9UL46 239 aa15.9■□□□□ 0.14
TMEM53-209ENST00000495630 C1orf226A1L170 272 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 LRRC14BA6NHZ5 514 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 OR6C70A6NIJ9 312 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
TMEM53-209ENST00000495630 CSNK2A2P19784 350 aaPredicted RBP15.89■□□□□ 0.13
TMEM53-209ENST00000495630 CNTFP26441 200 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 CLDN18P56856 261 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 GPX6P59796 221 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 SLMAPQ14BN4 828 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 ACAP2Q15057 778 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 CCNYL2Q5T2Q4 361 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 C10orf62Q5T681 223 aaPredicted RBP15.89■□□□□ 0.13
TMEM53-209ENST00000495630 SLC48A1Q6P1K1 146 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 CXXC5Q7LFL8 322 aaKnown RBP15.89■□□□□ 0.13
TMEM53-209ENST00000495630 P4HA3Q7Z4N8 544 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 KCTD4Q8WVF5 259 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 PERPQ96FX8 193 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 SFXN2Q96NB2 322 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 COL21A1Q96P44 957 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 FAM111AQ96PZ2 611 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 GSX2Q9BZM3 304 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 UBTD1Q9HAC8 227 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 MAT2BQ9NZL9 334 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 WHRNQ9P202 907 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 PRODH2Q9UF12 536 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 PCDHA9Q9Y5H5 950 aa15.89■□□□□ 0.13
TMEM53-209ENST00000495630 TLN2Q9Y4G6 2542 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 A0A087X1B8 175 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 TRIM64A6NGJ6 449 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 TRIM64BA6NI03 449 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 INAFM1C9JVW0 142 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 C16orf97H3BN30 126 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 ZIC3O60481 467 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 ABCB7O75027 752 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 UGT2B10P36537 528 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 FEN1P39748 380 aaKnown RBP15.88■□□□□ 0.13
TMEM53-209ENST00000495630 PAFAH1B1P43034 410 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 MAPK12P53778 367 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 CALCOCO2Q13137 446 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 EXOSC7Q15024 291 aaKnown RBP15.88■□□□□ 0.13
TMEM53-209ENST00000495630 FRG2Q64ET8 278 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 ZNF474Q6S9Z5 364 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-209ENST00000495630 CENPLQ8N0S6 344 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-209ENST00000495630 PPP1R14CQ8TAE6 165 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 ATP6V1E2Q96A05 226 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 PGM2Q96G03 612 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 FRG2BQ96QU4 278 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 TRPS1Q9UHF7 1281 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 FBXL2Q9UKC9 423 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 PLLPQ9Y342 182 aa15.88■□□□□ 0.13
TMEM53-209ENST00000495630 FRG2CA6NGY1 282 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 REM1O75628 298 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 CNOT4O95628 575 aaKnown RBP15.87■□□□□ 0.13
TMEM53-209ENST00000495630 CBX7O95931 251 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 C2P06681 752 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 EMDP50402 254 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 BTLAQ7Z6A9 289 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 MED12LQ86YW9 2145 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 METTL4Q8N3J2 472 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 GBP7Q8N8V2 638 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-209ENST00000495630 CNEP1R1Q8N9A8 125 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 ADCY4Q8NFM4 1077 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 OR52R1Q8NGF1 315 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 TMBIM1Q969X1 311 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 MARK4Q96L34 752 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 ERP44Q9BS26 406 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 NTMT1Q9BV86 223 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 MRPL1Q9BYD6 325 aaKnown RBP15.87■□□□□ 0.13
TMEM53-209ENST00000495630 NOL11Q9H8H0 719 aaKnown RBP15.87■□□□□ 0.13
TMEM53-209ENST00000495630 EHD3Q9NZN3 535 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 GPR55Q9Y2T6 319 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-209ENST00000495630 SAR1BQ9Y6B6 198 aa15.87■□□□□ 0.13
TMEM53-209ENST00000495630 RTTNQ86VV8 2226 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms