RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SLC22A10Q63ZE4 541 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 TATDN1Q6P1N9 297 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CCDC91Q7Z6B0 441 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CEND1Q8N111 149 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 OR13F1Q8NGS4 319 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 TMEM37Q8WXS4 190 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 KRT35Q92764 455 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 TMEM45BQ96B21 275 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 C11orf24Q96F05 449 aaPredicted RBP3.58□□□□□ -1.84
CCDC39-206ENST00000489868 SPATA13Q96N96 652 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 OR5M11Q96RB7 305 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 TRPV6Q9H1D0 765 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 COPS7AQ9UBW8 275 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 ZFP92A6NM28 416 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 SDC3O75056 442 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 ZMYM6O95789 1325 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 SMC1AQ14683 1233 aaKnown RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 RFTN1Q14699 578 aaPredicted RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 DHX29Q7Z478 1369 aaKnown RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 PRR22Q8IZ63 422 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 OR52J3Q8NH60 311 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 CCDC26Q8TAB7 109 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 U2AF1L4Q8WU68 220 aaKnown RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 DNAJA3Q96EY1 480 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 ZNF560Q96MR9 790 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 HCAR1Q9BXC0 346 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 TMEM9Q9P0T7 183 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 LHX3Q9UBR4 397 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 PURGQ9UJV8 347 aaKnown RBP3.57□□□□□ -1.84
CCDC39-206ENST00000489868 ABCG2Q9UNQ0 655 aa3.57□□□□□ -1.84
CCDC39-206ENST00000489868 RAD54L2Q9Y4B4 1467 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 A0A0J9YVX5 310 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 TMEM89A2RUT3 159 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 NME2P1O60361 137 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 LYPD3O95274 346 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 APRTP07741 180 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 ATP6V1B1P15313 513 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 ELK1P19419 428 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 PRKAR2BP31323 418 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 XCR1P46094 333 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 PRR5LQ6MZQ0 368 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 DLEU7Q6UYE1 221 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 DPY19L2P2Q6ZN68 376 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 Q6ZVH6 145 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 TOM1L2Q6ZVM7 507 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 AMZ2Q86W34 360 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 TM2D1Q9BX74 207 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 ALDH8A1Q9H2A2 487 aaPredicted RBP3.56□□□□□ -1.84
CCDC39-206ENST00000489868 MEPEQ9NQ76 525 aaPredicted RBP3.56□□□□□ -1.84
CCDC39-206ENST00000489868 CYP39A1Q9NYL5 469 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 KLRF1Q9NZS2 232 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 FAM153AQ9UHL3 310 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 TRMT6Q9UJA5 497 aaKnown RBP3.56□□□□□ -1.84
CCDC39-206ENST00000489868 CA5BQ9Y2D0 317 aa3.56□□□□□ -1.84
CCDC39-206ENST00000489868 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 LATO43561 262 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 LCMT2O60294 686 aaKnown RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 PRG2P13727 222 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 HNRNPFP52597 415 aaKnown RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 ACTN3Q08043 901 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 CD47Q08722 323 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 RPA4Q13156 261 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 SERTAD2Q14140 314 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 LIPKQ5VXJ0 399 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 YRDCQ86U90 279 aaKnown RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 APOBEC3FQ8IUX4 373 aaKnown RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 ZNF397Q8NF99 534 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 LINC01006Q8NI28 216 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 CABS1Q96KC9 395 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 MID1IP1Q9NPA3 183 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 HPS4Q9NQG7 708 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 PRMT8Q9NR22 394 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-206ENST00000489868 MBD2Q9UBB5 411 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 CLIP2Q9UDT6 1046 aa3.55□□□□□ -1.84
CCDC39-206ENST00000489868 C11orf98E9PRG8 122 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 H0Y9J4 135 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 H3BMH7 237 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 TOXO94900 526 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 IGSF6O95976 241 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 ABHD2P08910 425 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 ZCCHC18P0CG32 403 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 STX17P56962 302 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 TSTA3Q13630 321 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-206ENST00000489868 TSEN54Q7Z6J9 526 aaKnown RBP3.54□□□□□ -1.84
CCDC39-206ENST00000489868 ADGRD2Q7Z7M1 963 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 RANBP3LQ86VV4 465 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-206ENST00000489868 MLKLQ8NB16 471 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 TFB1MQ8WVM0 346 aaKnown RBP3.54□□□□□ -1.84
CCDC39-206ENST00000489868 KIR2DL4Q99706 377 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 OPN3Q9H1Y3 402 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-206ENST00000489868 COMMD8Q9NX08 183 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 KLHL21Q9UJP4 597 aa3.54□□□□□ -1.84
CCDC39-206ENST00000489868 IGLV8-61A0A075B6I0 122 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 LRIT2A6NDA9 550 aa3.53□□□□□ -1.84
CCDC39-206ENST00000489868 CFLARO15519 480 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms