RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 DTX3Q8N9I9 347 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 OR2L3Q8NG85 312 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 OR8J1Q8NGP2 316 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 TBC1D29Q9UFV1 150 aa14.77□□□□□ -0.04
BRD9-208ENST00000489816 GPC6Q9Y625 555 aaPredicted RBP14.77□□□□□ -0.04
BRD9-208ENST00000489816 KIF26AQ9ULI4 1882 aaPredicted RBP14.77□□□□□ -0.04
BRD9-208ENST00000489816 SLC2A10O95528 541 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 CSTF2P33240 577 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRD9-208ENST00000489816 RCVRNP35243 200 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 PCYT1AP49585 367 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 ARHGAP19Q14CB8 494 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 FLYWCH1Q4VC44 716 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 RAB42Q8N4Z0 105 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 CENPVL1A0A0U1RR11 272 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 ERGP11308 486 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 SOX18P35713 384 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 ELOAQ14241 798 aaKnown RBP14.77□□□□□ -0.05
BRD9-208ENST00000489816 SMARCD3Q6STE5 483 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 RBM12BQ8IXT5 1001 aaKnown RBP14.77□□□□□ -0.05
BRD9-208ENST00000489816 OR4F15Q8NGB8 312 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 OR52I1Q8NGK6 324 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 OR8D4Q8NGM9 314 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
BRD9-208ENST00000489816 FAIM2Q9BWQ8 316 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 TEX101Q9BY14 249 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 SLC17A9Q9BYT1 436 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 SEMA4GQ9NTN9 838 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 ASB4Q9Y574 426 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 KLK4Q9Y5K2 254 aa14.77□□□□□ -0.05
BRD9-208ENST00000489816 CACNA1CQ13936 2221 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 TDRD6O60522 2096 aaKnown RBP14.76□□□□□ -0.05
BRD9-208ENST00000489816 SH3D21A4FU49 640 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 FCARP24071 287 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SLC15A1P46059 708 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 PPP2CBP62714 309 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 PPP2CAP67775 309 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SRSF5Q13243 272 aaKnown RBP14.76□□□□□ -0.05
BRD9-208ENST00000489816 C16orf62Q7Z3J2 963 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ZNF761Q86XN6 746 aaPredicted RBP14.76□□□□□ -0.05
BRD9-208ENST00000489816 NUP43Q8NFH3 380 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 LCN9Q8WX39 176 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 PATE1Q8WXA2 126 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 TM9SF4Q92544 642 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 OR7D2Q96RA2 312 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SDHCQ99643 169 aaPredicted RBP14.76□□□□□ -0.05
BRD9-208ENST00000489816 RPL36Q9Y3U8 105 aaKnown RBP14.76□□□□□ -0.05
BRD9-208ENST00000489816 FAM170BA6NMN3 283 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 PIP5K1CO60331 668 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 TGM3Q08188 693 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 KCNJ8Q15842 424 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ATAD3BQ5T9A4 648 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ENPP7Q6UWV6 458 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 NRARPQ7Z6K4 114 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 GATAD2AQ86YP4 633 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 PHC2Q8IXK0 858 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SLC7A5P1Q8MH63 180 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 C7orf57Q8NEG2 295 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ITFG2Q969R8 447 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ABHD8Q96I13 439 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 TBX5Q99593 518 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SLC30A2Q9BRI3 323 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 BTBD1Q9H0C5 482 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 SAP130Q9H0E3 1048 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 ACSL5Q9ULC5 683 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 CFL2Q9Y281 166 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 VPS13AQ96RL7 3174 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 COL4A3Q01955 1670 aa14.76□□□□□ -0.05
BRD9-208ENST00000489816 MPZL2O60487 215 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 CLEC3AO75596 197 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 SCG5P05408 212 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 ALOX5P09917 674 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 GNSP15586 552 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 IGFALSP35858 605 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 ATP6V1E1P36543 226 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 CRYBB2P43320 205 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 PDX1P52945 283 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 HNRNPA0Q13151 305 aaKnown RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 GPR68Q15743 365 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 BAK1Q16611 211 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 ZNF542PQ5EBM4 170 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 SLC35F1Q5T1Q4 408 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 NXNL2Q5VZ03 156 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 FAM111BQ6SJ93 734 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 ZNF582Q96NG8 517 aaPredicted RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 PCBD2Q9H0N5 130 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 SIAEQ9HAT2 523 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 CNOT2Q9NZN8 540 aaKnown RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 ENOPH1Q9UHY7 261 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 PEX16Q9Y5Y5 336 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 CSNK1G3Q9Y6M4 447 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 DOCK8Q8NF50 2099 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 ZC3H12DA2A288 527 aaKnown RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 ZNF888P0CJ79 500 aaPredicted RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 PVRP15151 417 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 RPE65Q16518 533 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 MFSD4BQ5TF39 518 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 NCCRP1Q6ZVX7 275 aaPredicted RBP14.75□□□□□ -0.05
BRD9-208ENST00000489816 BBS1Q8NFJ9 593 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 RAB7BQ96AH8 199 aa14.75□□□□□ -0.05
BRD9-208ENST00000489816 TRNT1Q96Q11 434 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms