RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CRYZQ08257 329 aaKnown RBP21.03■□□□□ 0.96
COL9A3-213ENST00000489045 TOMM20Q15388 145 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 CFAP157Q5JU67 520 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 TMEM81Q6P7N7 255 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 RDH11Q8TC12 318 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 ERP27Q96DN0 273 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 OSBPL11Q9BXB4 747 aa21.03■□□□□ 0.96
COL9A3-213ENST00000489045 COPEO14579 308 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 TO15178 435 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 UGT2B11O75310 529 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 NME6O75414 186 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-213ENST00000489045 CRCPO75575 148 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 BCAS2O75934 225 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-213ENST00000489045 PTPN6P29350 595 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 PTGDSP41222 190 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 KRTAP10-9P60411 292 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 TLE4Q04727 773 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 ZNF763Q0D2J5 394 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 CEBPEQ15744 281 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 ERCC6LQ2NKX8 1250 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 RIPPLY2Q5TAB7 128 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 TIGD3Q6B0B8 471 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 ANGPTL8Q6UXH0 198 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 LIX1LQ8IVB5 337 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 C4orf33Q8N1A6 199 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 OR1J4Q8NGS1 313 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 TMBIM1Q969X1 311 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 GALNT9Q9HCQ5 603 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 TNFRSF12AQ9NP84 129 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 OXSMQ9NWU1 459 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 KLRF1Q9NZS2 232 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 GPR55Q9Y2T6 319 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-213ENST00000489045 SLC6A5Q9Y345 797 aa21.02■□□□□ 0.96
COL9A3-213ENST00000489045 KIAA1549Q9HCM3 1950 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 FAM47E-STBD1D6RA91 191 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 H3BQF6 201 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 ICOSLGO75144 302 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 CPA3P15088 417 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 KRT4P19013 534 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 DDCP20711 480 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 ELAVL4P26378 380 aaKnown RBP21.01■□□□□ 0.95
COL9A3-213ENST00000489045 C2orf80Q0P641 193 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 EIPR1Q53HC9 387 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 SLC30A6Q6NXT4 461 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 FAM9CQ8IZT9 166 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 BTBD9Q96Q07 612 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 TIMP4Q99727 224 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 SHCBP1LQ9BZQ2 653 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 SENP1Q9P0U3 644 aa21.01■□□□□ 0.95
COL9A3-213ENST00000489045 POLR3HQ9Y535 204 aaPredicted RBP21.01■□□□□ 0.95
COL9A3-213ENST00000489045 MED12Q93074 2177 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 C2orf72A6NCS6 295 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 PRAMEF25A6NGN4 478 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 SNPHO15079 494 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 MPIP34949 423 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 CORO7P57737 925 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 SNTA1Q13424 505 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 PRSS53Q2L4Q9 553 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 ACSF3Q4G176 576 aaPredicted RBP21■□□□□ 0.95
COL9A3-213ENST00000489045 WIPI1Q5MNZ9 446 aaPredicted RBP21■□□□□ 0.95
COL9A3-213ENST00000489045 SEM1Q6ZVN7 128 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 TRIM46Q7Z4K8 759 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 DMRTC2Q8IXT2 367 aaPredicted RBP21■□□□□ 0.95
COL9A3-213ENST00000489045 OR7G2Q8NG99 324 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 VSTM2LQ96N03 204 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 BBS4Q96RK4 519 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 PRDM14Q9GZV8 571 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 FOLH1BQ9HBA9 442 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 MCCC2Q9HCC0 563 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 MYNNQ9NPC7 610 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 MAPRE3Q9UPY8 281 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 CCDC168Q8NDH2 2452 aa21■□□□□ 0.95
COL9A3-213ENST00000489045 OR6C70A6NIJ9 312 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 AHRRA9YTQ3 701 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 KDM4EB2RXH2 506 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 ERN1O75460 977 aaKnown RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 REM1O75628 298 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 RSL1D1O76021 490 aaKnown RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 CT45A8P0DMV1 189 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 CT45A9P0DMV2 189 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 SLC18A2Q05940 514 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 CT45A2Q5DJT8 189 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 LIPMQ5VYY2 423 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 VASNQ6EMK4 673 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 FAM71E1Q6IPT2 247 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 NPSR1Q6W5P4 371 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 WDR53Q7Z5U6 358 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 FAM83FQ8NEG4 500 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 COL21A1Q96P44 957 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 UGT2B28Q9BY64 529 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 ANKZF1Q9H8Y5 726 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 MIEF1Q9NQG6 463 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 RRAGDQ9NQL2 400 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-213ENST00000489045 CAMK2AQ9UQM7 478 aa20.99■□□□□ 0.95
COL9A3-213ENST00000489045 MYO1GB0I1T2 1018 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 PLOD3O60568 738 aa20.98■□□□□ 0.95
COL9A3-213ENST00000489045 JUNP05412 331 aaKnown RBP20.98■□□□□ 0.95
COL9A3-213ENST00000489045 UROSP10746 265 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms