RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 MS4A4EQ96PG1 132 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 BTBD9Q96Q07 612 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 NEUROD4Q9HD90 331 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 ZCCHC3Q9NUD5 404 aaKnown RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 PCDHGB4Q9UN71 923 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 NPFFR2Q9Y5X5 522 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 SPTA1P02549 2419 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 SMG1Q96Q15 3661 aaKnown RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 PRSS51A0A1B0GVH4 220 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 ACOX3O15254 700 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 NME2P1O60361 137 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 IFI6P09912 130 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CT45A8P0DMV1 189 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CT45A9P0DMV2 189 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 NME2P22392 152 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 ABCD3P28288 659 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CCT3P49368 545 aaKnown RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 FBXW4P57775 412 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 PRR5P85299 388 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 PMP22Q01453 160 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 TP53BP2Q13625 1128 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 ZNHIT3Q15649 155 aaPredicted RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 INPP5JQ15735 1006 aaPredicted RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 ZNF791Q3KP31 576 aaPredicted RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CT45A2Q5DJT8 189 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 PSD4Q8NDX1 1056 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 OR10G3Q8NGC4 313 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 OR5AK3PQ8NH89 298 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CPT1CQ8TCG5 803 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 HSPBAP1Q96EW2 488 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 OR52E6Q96RD3 313 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 FAM120CQ9NX05 1096 aaKnown RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 OR10H1Q9Y4A9 318 aa18.04■□□□□ 0.48
SEC22A-208ENST00000487572 COPG1Q9Y678 874 aaKnown RBP18.04■□□□□ 0.48
SEC22A-208ENST00000487572 CAPN14A8MX76 684 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 G3V3Y1 287 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 SCN2BO60939 215 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 RASAL1O95294 804 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 PGRP06401 933 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 CCL3P10147 92 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 POLR2JP52435 117 aaKnown RBP18.03■□□□□ 0.48
SEC22A-208ENST00000487572 ARFIP2P53365 341 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 GPR85P60893 370 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 TLE1Q04724 770 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 FAM180AQ6UWF9 173 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 SLC34A3Q8N130 599 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 CLEC4FQ8N1N0 589 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 OR4N2Q8NGD1 307 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 PSMA8Q8TAA3 256 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 STON2Q8WXE9 905 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 SLC9A6Q92581 669 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 JADE3Q92613 823 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 TMBIM1Q969X1 311 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 SNRNP40Q96DI7 357 aaKnown RBP18.03■□□□□ 0.48
SEC22A-208ENST00000487572 OMA1Q96E52 524 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 CHMP6Q96FZ7 201 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 C16orf58Q96GQ5 468 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 SGCZQ96LD1 299 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 ZNF317Q96PQ6 595 aaPredicted RBP18.03■□□□□ 0.48
SEC22A-208ENST00000487572 YIPF4Q9BSR8 244 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 TRIM4Q9C037 500 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 NTMQ9P121 344 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 TRIM33Q9UPN9 1127 aa18.03■□□□□ 0.48
SEC22A-208ENST00000487572 KLF13Q9Y2Y9 288 aaPredicted RBP18.03■□□□□ 0.48
SEC22A-208ENST00000487572 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 FAM234BA2RU67 622 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 IL6P05231 212 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 ZFP36L2P47974 494 aaKnown RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 TMED10P49755 219 aaKnown RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 PSG6Q00889 435 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 SQLEQ14534 574 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 NTRK2Q16620 822 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 TIGD2Q4W5G0 525 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 MFSD12Q6NUT3 480 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 RPUSD3Q6P087 351 aaKnown RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 ZNF605Q86T29 641 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 SULF2Q8IWU5 870 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 DND1Q8IYX4 353 aaKnown RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 GOLM1Q8NBJ4 401 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 OR56A1Q8NGH5 318 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 SFXN5Q8TD22 340 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 GIMAP5Q96F15 307 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 OTUB1Q96FW1 271 aaPredicted RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 TAAR6Q96RI8 345 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 LMF2Q9BU23 707 aaKnown RBP18.02■□□□□ 0.48
SEC22A-208ENST00000487572 SACM1LQ9NTJ5 587 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 NTNG1Q9Y2I2 539 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 PCDHGB6Q9Y5F9 930 aa18.02■□□□□ 0.48
SEC22A-208ENST00000487572 COL6A6A6NMZ7 2263 aa18.02■□□□□ 0.47
SEC22A-208ENST00000487572 CNTRLQ7Z7A1 2325 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 CFAP46Q8IYW2 2715 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 A0A0G2JMM0 328 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 RNF103-CHMP3A0A140T963 221 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 A0A1W2PPB8 328 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 A0A1W2PRS3 328 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 KIR3DP1A8MWS1 328 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 TP53I11O14683 189 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 TO15178 435 aa18.01■□□□□ 0.47
SEC22A-208ENST00000487572 PEX1O43933 1283 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms