RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CNPPD1Q9BV87 410 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 TESQ9UGI8 421 aaKnown RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CHD7Q9P2D1 2997 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 NINQ8N4C6 2090 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 C4orf51C9J302 202 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 M0R3H8 397 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 CTDSP2O14595 271 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 EPPINO95925 133 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 CHRM5P08912 532 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-208ENST00000487245 HBQ1P09105 142 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 F3P13726 295 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 MMP11P24347 488 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 TPTEP56180 551 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 COPZ1P61923 177 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 DESI1Q6ICB0 168 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 USP30Q70CQ3 517 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 AKAP14Q86UN6 197 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 CLIP4Q8N3C7 705 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 SLC22A18Q96BI1 424 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 CNRIP1Q96F85 164 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-208ENST00000487245 PINK1Q9BXM7 581 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 FBXW2Q9UKT8 454 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 KLHL20Q9Y2M5 609 aa24.54■■□□□ 1.52
HLA-C-208ENST00000487245 IRGMA1A4Y4 181 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 EPOPA6NHQ4 379 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 GLOD5A6NK44 160 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 RAB36O95755 333 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 HOXB2P14652 356 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 TNFSF8P32971 234 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 RPS19P39019 145 aaKnown RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 GIPRP48546 466 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 RORCP51449 518 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 PRKAG1P54619 331 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 RPS15AP62244 130 aaKnown RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 GPR19Q15760 415 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 ATAD3BQ5T9A4 648 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 CCBE1Q6UXH8 406 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 MRGPREQ86SM8 312 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 CCDC116Q8IYX3 515 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 TVP23BQ9NYZ1 205 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 APOBEC3BQ9UH17 382 aaKnown RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 MSRAQ9UJ68 235 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 PROM1O43490 865 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 PRKYO43930 277 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 APOA1P02647 267 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 STATHP02808 62 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 TNNI3P19429 210 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 SOX3P41225 446 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 FUT5Q11128 374 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 GINS1Q14691 196 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 CEBPEQ15744 281 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 SYT14P1Q58G82 188 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 TJAP1Q5JTD0 557 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 PAQR7Q86WK9 346 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 KCNS3Q9BQ31 491 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 MACROD1Q9BQ69 325 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 POLR2J2Q9GZM3 115 aaKnown RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 SLC6A17Q9H1V8 727 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 CALML5Q9NZT1 146 aa24.53■■□□□ 1.52
HLA-C-208ENST00000487245 LAMA2P24043 3122 aaKnown RBP24.53■■□□□ 1.52
HLA-C-208ENST00000487245 IQCMA0A1B0GVH7 501 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 A0A1W2PQF6 199 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 SYT5O00445 386 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 MYL12BO14950 172 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 PRKRAO75569 313 aaKnown RBP24.52■■□□□ 1.52
HLA-C-208ENST00000487245 HMGN2P05204 90 aaKnown RBP24.52■■□□□ 1.52
HLA-C-208ENST00000487245 ASGR2P07307 311 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 CHRM4P08173 479 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 MAN2A2P49641 1150 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 RGS1Q08116 209 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 NFATC4Q14934 902 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 KLHL22Q53GT1 634 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 C3orf38Q5JPI3 329 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 NRROSQ86YC3 692 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 SCAIQ8N9R8 606 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 OR52I1Q8NGK6 324 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 GAL3ST3Q96A11 431 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 SIPA1Q96FS4 1042 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 RIPOR3Q96MK2 946 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 BARHL1Q9BZE3 327 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 KCNK12Q9HB15 430 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 FGF20Q9NP95 211 aaPredicted RBP24.52■■□□□ 1.52
HLA-C-208ENST00000487245 EXOSC4Q9NPD3 245 aaKnown RBP24.52■■□□□ 1.52
HLA-C-208ENST00000487245 ISYNA1Q9NPH2 558 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 NPAP1Q9NZP6 1156 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 TBC1D29Q9UFV1 150 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 PCOLCE2Q9UKZ9 415 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 SSR3Q9UNL2 185 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 CAB39Q9Y376 341 aaPredicted RBP24.52■■□□□ 1.52
HLA-C-208ENST00000487245 ZNF780BQ9Y6R6 833 aa24.52■■□□□ 1.52
HLA-C-208ENST00000487245 WASHC1A8K0Z3 465 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 ASNA1O43681 348 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 KLF8O95600 359 aaPredicted RBP24.51■■□□□ 1.51
HLA-C-208ENST00000487245 APBB3O95704 486 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 CERS1P27544 350 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 LASP1Q14847 261 aaKnown RBP24.51■■□□□ 1.51
HLA-C-208ENST00000487245 ENPP7Q6UWV6 458 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 PHC2Q8IXK0 858 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 OR4E2Q8NGC2 313 aa24.51■■□□□ 1.51
HLA-C-208ENST00000487245 OR6T1Q8NGN1 323 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms