RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 M0R3H8 397 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PRAMEF2O60811 474 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ADAP00813 363 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GABRB3P28472 473 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 EMP2P54851 167 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SELENOVP59797 346 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PGBD5Q8N414 524 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 THAP4Q8WY91 577 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MSLNLQ96KJ4 702 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SERINC2Q96SA4 455 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 RTP3Q9BQQ7 232 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ZDBF2Q9HCK1 2354 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 LOC100509620A0A075B734 347 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 A0A0J9YY10 115 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MROH6A6NGR9 719 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 DDCP20711 480 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MAP2K4P45985 399 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 RAB2AP61019 212 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ADAM15Q13444 863 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ELOAQ14241 798 aaKnown RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SEC23BQ15437 767 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GTF2IRD2BQ6EKJ0 949 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SHISA6Q6ZSJ9 500 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GTF2IRD2Q86UP8 949 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ZNF227Q86WZ6 799 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 TMEFF1Q8IYR6 380 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 TOR1AIP2Q8NFQ8 470 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 CCDC107Q8WV48 283 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ZNF576Q9H609 170 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 KCMF1Q9P0J7 381 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 RIMS3Q9UJD0 308 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ATXN7L1Q9ULK2 861 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PLEKHA6Q9Y2H5 1048 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PCDHGB6Q9Y5F9 930 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GMEB1Q9Y692 573 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PRSS38A1L453 326 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 FRS3O43559 492 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 C1orf105O95561 183 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 OXSR1O95747 527 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 P04436 131 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 RETP07949 1114 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ADRA1AP35348 466 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 IRS1P35568 1242 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 XCR1P46094 333 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ZNF84P51523 738 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 HNRNPA0Q13151 305 aaKnown RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ZNF548Q8NEK5 533 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 OR6C4Q8NGE1 309 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 OR9A2Q8NGT5 310 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 OR4K13Q8NH42 304 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GAL3ST3Q96A11 431 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 KCNK13Q9HB14 408 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 STARD5Q9NSY2 213 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SCGNO76038 276 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ABLIM3O94929 683 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GPX3P22352 226 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PSMB5P28074 263 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 ACVR1BP36896 505 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 DCTP40126 519 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 GALK2Q01415 458 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 DNASE1L3Q13609 305 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 THOC7Q6I9Y2 204 aaKnown RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MCATQ8IVS2 390 aaKnown RBP12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 SGCDQ92629 289 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
HDLBP-241ENST00000487169 HHLA1C9JL84 531 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 HBQ1P09105 142 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 C1SP09871 688 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 CNR2P34972 360 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 ACTC1P68032 377 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 ACTA1P68133 377 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 OR52E2Q8NGJ4 325 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-241ENST00000487169 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 CWH43Q9H720 699 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 ENAMQ9NRM1 1142 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 CLEC4EQ9ULY5 219 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 ZNF318Q5VUA4 2279 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 SGK494L7N484 410 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 MITFO75030 526 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-241ENST00000487169 LDB3O75112 727 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 SEMA3DO95025 777 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 SGSHP51688 502 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 VEZF1Q14119 521 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 TMPPEQ6ZT21 453 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 OR4C15Q8NGM1 316 aa12.65□□□□□ -0.38
HDLBP-241ENST00000487169 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms