RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZNF232Q9UNY5 417 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SRPK3Q9UPE1 567 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 POFUT2Q9Y2G5 429 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SH3GLB1Q9Y371 365 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 HCN4Q9Y3Q4 1203 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 CLDN16Q9Y5I7 305 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 U3KQA8 63 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 U3KQV3 271 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 A0A087WXM4 84 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 SMIM31A0A1B0GVY4 71 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 A0A1W2PRQ8 180 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 DPPA5A6NC42 116 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TMEM150CB9EJG8 249 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 FAAHO00519 579 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 DSCR3O14972 297 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 DIRAS1O95057 198 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 GADD45GO95257 159 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CPNE6O95741 557 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CBX7O95931 251 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ONECUT2O95948 504 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CLPTM1O96005 669 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CTSBP07858 339 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 GNAO1P09471 354 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ACP2P11117 423 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 RPS4Y1P22090 263 aaKnown RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 PRKACGP22612 351 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 OR1E2P47887 323 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CXCR4P61073 352 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TEKQ02763 1124 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 FUT7Q11130 342 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 STX4Q12846 297 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 SRSF5Q13243 272 aaKnown RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 DSG2Q14126 1118 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 DGCR6Q14129 220 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TRMT12Q53H54 448 aaKnown RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 EIPR1Q53HC9 387 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF691Q5VV52 312 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TTC33Q6PID6 262 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 FRRS1Q6ZNA5 592 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 QSOX2Q6ZRP7 698 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ARHGAP22Q7Z5H3 698 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TSPYL5Q86VY4 417 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 PEX5LQ8IYB4 626 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 TMEM105Q8N8V8 129 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 OR7G1Q8NGA0 311 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 OR10G2Q8NGC3 310 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 OR51Q1Q8NH59 317 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 HDAC2Q92769 488 aaKnown RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 SLC35B4Q969S0 331 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF501Q96CX3 271 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 MMABQ96EY8 250 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 SDF2Q99470 211 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ARHGDIGQ99819 225 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 YIPF4Q9BSR8 244 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 NDC1Q9BTX1 674 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 ALOXE3Q9BYJ1 711 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 GAREM1Q9H706 876 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 IRAK4Q9NWZ3 460 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 KLHL28Q9NXS3 571 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 NDRG4Q9ULP0 352 aaKnown RBP10.86□□□□□ -0.67
PRKCB-207ENST00000486868 PCDHGB2Q9Y5G2 931 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 PCDHGA5Q9Y5G8 931 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 KCNE3Q9Y6H6 103 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 CEP192Q8TEP8 1941 aa10.86□□□□□ -0.67
PRKCB-207ENST00000486868 SIGLEC6O43699 453 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 STX11O75558 287 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CCNB2O95067 398 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ADAP00813 363 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 H1F0P07305 194 aaKnown RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CKMT1AP12532 417 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CBLP22681 906 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 IFNA8P32881 189 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 NR1H2P55055 460 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CDH12P55289 794 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CSNK2BP67870 215 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CHRNEQ04844 493 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 SLC13A2Q13183 592 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 LARS2Q15031 903 aaKnown RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ZNHIT3Q15649 155 aaPredicted RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 DUSP5Q16690 384 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 AMZ1Q400G9 498 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF311Q5JNZ3 666 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 TYW3Q6IPR3 259 aaKnown RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 CD300LDQ6UXZ3 194 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF619Q8N2I2 560 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 Q8N9G6 341 aaPredicted RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 TSPAN14Q8NG11 270 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 OR1L3Q8NH93 324 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
PRKCB-207ENST00000486868 RIT1Q92963 219 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF566Q969W8 418 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 PEX11GQ96HA9 241 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 FBXL20Q96IG2 436 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 PRRC1Q96M27 445 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 MUS81Q96NY9 551 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 DGAT2Q96PD7 388 aa10.85□□□□□ -0.67
PRKCB-207ENST00000486868 ALPK1Q96QP1 1244 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms