RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 IL1RL2Q9HB29 575 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 ARMC1Q9NVT9 282 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 SEC14L3Q9UDX4 400 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 MAGEL2Q9UJ55 1249 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 CNOT11Q9UKZ1 510 aaKnown RBP8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 AP4S1Q9Y587 144 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 SNX13Q9Y5W8 968 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 GMEB1Q9Y692 573 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
TMEM39A-208ENST00000486159 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 A0A1B0GUH1 482 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 A8MUA0 341 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MAGEB17A8MXT2 336 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 H0YIG0 161 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 H0YJX3 145 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 HNRNPRO43390 633 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 B4GALT2O60909 372 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SERPIND1P05546 499 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 TCN1P20061 433 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 IL10P22301 178 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 PPIBP23284 216 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 TIA1P31483 386 aaKnown RBP eCLIP8.74□□□□□ -1.017e-10■■■■■ 33.1
TMEM39A-208ENST00000486159 HSPA13P48723 471 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 GSK3BP49841 420 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MMP16P51512 607 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SESN3P58005 492 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 RPS15AP62244 130 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SFT2D3Q587I9 215 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 RUNDC3AQ59EK9 446 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF766Q5HY98 468 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 RNFT1Q5M7Z0 435 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SPANXN4Q5MJ08 99 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 OGFRL1Q5TC84 451 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 FAM219BQ5XKK7 198 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 PLAG1Q6DJT9 500 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 H3F3CQ6NXT2 135 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SLC2A7Q6PXP3 512 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 C3P1Q6ZMU1 363 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF227Q86WZ6 799 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MCEMP1Q8IX19 187 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 RNF148Q8N7C7 305 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MFSD9Q8NBP5 474 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MDS2Q8NDY4 140 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 HIPK4Q8NE63 616 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ADAMTS18Q8TE60 1221 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 NRG4Q8WWG1 115 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 METTL21AQ8WXB1 218 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 MTERF1Q99551 399 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ECSITQ9BQ95 431 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SLC39A3Q9BRY0 314 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 CENPKQ9BS16 269 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 SPATA9Q9BWV2 254 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 KLHL31Q9H511 634 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 CDCP1Q9H5V8 836 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 DMRT3Q9NQL9 472 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 CCM2LQ9NUG4 571 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ATAD3AQ9NVI7 634 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ABI3Q9P2A4 366 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 BTNL2Q9UIR0 455 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 TINAGQ9UJW2 476 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ADAM29Q9UKF5 820 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 CORO2BQ9UQ03 480 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 ENTPD4Q9Y227 616 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 DLGAP4Q9Y2H0 992 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 LRCH1Q9Y2L9 728 aa8.74□□□□□ -1.01
TMEM39A-208ENST00000486159 TRBV5-3A0A0A0MS03 114 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 A0A0G2JN53 185 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 MYOCOSA0A1B0GUC4 107 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ANKDD1BA6NHY2 528 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 C9JVG2 144 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 NPIPA5E9PKD4 350 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 TXNDC9O14530 226 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CHST10O43529 356 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 OR1F1O43749 312 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 SCELO95171 688 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ANXA4P09525 319 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ZCCHC18P0CG32 403 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF888P0CJ79 500 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 COX7A2P14406 83 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PSMA4P25789 261 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 GRK3P35626 688 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CA7P43166 264 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CLCN2P51788 898 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 DGKQP52824 942 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PER3P56645 1201 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 SLC26A5P58743 744 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 RAB8AP61006 207 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 RPS13P62277 151 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 MRPS22P82650 360 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 REEP5Q00765 189 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF763Q0D2J5 394 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 HYAL2Q12891 473 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 DDX39BQ13838 428 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CAPRIN1Q14444 709 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 OR1C1Q15619 314 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 NSDHLQ15738 373 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms