RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TYROBPO43914 113 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 WDR1O75083 606 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SEC22BO75396 215 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 CBR3O75828 277 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SNUPNO95149 360 aaKnown RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 HPNP05981 417 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 NEFHP12036 1026 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 GABRA1P14867 456 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ELAVL4P26378 380 aaKnown RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 COL8A1P27658 744 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 HTR1EP28566 365 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ALDH3A1P30838 453 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 PTGER4P35408 488 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 PIGAP37287 484 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 RFC3P40938 356 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 FRKP42685 505 aaPredicted RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 ETV4P43268 484 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 MAGEA5P43359 124 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 DNASE1L1P49184 302 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 MAN2A2P49641 1150 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 PNLIPRP2P54317 469 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 DUSP2Q05923 314 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 C2orf80Q0P641 193 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 DUSP8Q13202 625 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SF3B4Q15427 424 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS50-218ENST00000485994 IMPG1Q17R60 797 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 NHSL2Q5HYW2 709 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SPDYAQ5MJ70 313 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 FNDC7Q5VTL7 733 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ACAD11Q709F0 780 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 CROCCP2Q86T23 111 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 MMP21Q8N119 569 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 C4orf33Q8N1A6 199 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 CCDC63Q8NA47 563 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 OR10G3Q8NGC4 313 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 OR52R1Q8NGF1 315 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 OR2W6PQ8NHA6 318 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 NEIL3Q8TAT5 605 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 TCP10LQ8TDR4 215 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 DIO2Q92813 273 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 HOXB13Q92826 284 aaPredicted RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 HGDQ93099 445 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 KLHL29Q96CT2 875 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 MTERF3Q96E29 417 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SLC35A4Q96G79 324 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 APOPT1Q96IL0 206 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 VSTM2LQ96N03 204 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ZIM3Q96PE6 472 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 GAL3ST4Q96RP7 486 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 KCNA7Q96RP8 456 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 HBEGFQ99075 208 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 SPOCK3Q9BQ16 436 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 PARD6BQ9BYG5 372 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 BRINP2Q9C0B6 783 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ENKD1Q9H0I2 346 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 TSPAN10Q9H1Z9 355 aaPredicted RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 SSU72Q9NP77 194 aaKnown RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 TNFRSF12AQ9NP84 129 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 GIMAP4Q9NUV9 329 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 C1orf109Q9NX04 203 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 TAS2R9Q9NYW1 312 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 COQ3Q9NZJ6 369 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 BCAP29Q9UHQ4 241 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 C19orf53Q9UNZ5 99 aaPredicted RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 EXO1Q9UQ84 846 aaKnown RBP6.42□□□□□ -1.38
VPS50-218ENST00000485994 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 DNAJC15Q9Y5T4 150 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ACTL7BQ9Y614 415 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 ABCA4P78363 2273 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 TRGV5A0A0B4J1U4 118 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 A0A0G2JMM0 328 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 A0A1W2PPB8 328 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 A0A1W2PRS3 328 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 LRRC3CA6NJW4 275 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 FAM166BA8MTA8 275 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 KIR3DP1A8MWS1 328 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 FAM47E-STBD1D6RA91 191 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PRSS44E7EML9 344 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 NPIPA2E9PIF3 369 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 NPIPA3F8WFD2 350 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CTIFO43310 598 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 CDC40O60508 579 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS50-218ENST00000485994 TSPAN2O60636 221 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ICOSLGO75144 302 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PDE9AO76083 593 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SOX30O94993 753 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PSMG1O95456 288 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CHEK2O96017 543 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 IGHA1P01876 353 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 TPOP07202 933 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 RFPL3SP0C7P2 107 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CT45A8P0DMV1 189 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CT45A9P0DMV2 189 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PCSK2P16519 638 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CHRNB4P30926 498 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PTGDSP41222 190 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 MAP3K8P41279 467 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ASMTP46597 345 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ALDH9A1P49189 494 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 FBXW4P57775 412 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms