RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GRAMD2AQ8IUY3 354 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 KLHL7Q8IXQ5 586 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 ZBED8Q8IZ13 594 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 ADCY4Q8NFM4 1077 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 OR7G1Q8NGA0 311 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 STAG3L4Q8TBR4 150 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 RNF138Q8WVD3 245 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 NXNL1Q96CM4 212 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 LCORQ96JN0 433 aaPredicted RBP11.63□□□□□ -0.55
UBR4-213ENST00000483922 MED18Q9BUE0 208 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 ANKRA2Q9H9E1 313 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 PSD3Q9NYI0 1048 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 MAT2BQ9NZL9 334 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 USF3Q68DE3 2245 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 PRAMEF25A6NGN4 478 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 SUPT3HB4E1H0 165 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 KERAO60938 352 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 SUPT3HO75486 399 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 KLK1P06870 262 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 PORP16435 677 aaPredicted RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 DRD5P21918 477 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 PIK3R1P27986 724 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 SRD5A2P31213 254 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 GPX6P59796 221 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 RPP38P78345 283 aaKnown RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 MRPS25P82663 173 aaKnown RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 GUSBP1Q15486 140 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 PLEKHM3Q6ZWE6 761 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 MYLK4Q86YV6 388 aaPredicted RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 PLCZ1Q86YW0 608 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 CNEP1R1Q8N9A8 125 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 L3MBTL4Q8NA19 623 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 TSPAN17Q96FV3 270 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 FAM111AQ96PZ2 611 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 CDK15Q96Q40 435 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 ACTR8Q9H981 624 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 PRM3Q9NNZ6 103 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 NSMCE4AQ9NXX6 385 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 KLRF1Q9NZS2 232 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 PLLPQ9Y342 182 aa11.62□□□□□ -0.55
UBR4-213ENST00000483922 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 CHD3Q12873 2000 aaKnown RBP11.62□□□□□ -0.55
UBR4-213ENST00000483922 GOLGA6L10A0A0M3HER8 536 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 TCRBV9S1A1TA0A576 114 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 FRG2CA6NGY1 282 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 FOXE1O00358 373 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 TO15178 435 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 TSPAN2O60636 221 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CDH16O75309 829 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 SIX3O95343 332 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 CRHP06850 196 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 POU2F1P14859 743 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 KRT15P19012 456 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 FEN1P39748 380 aaKnown RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 PPICP45877 212 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 EEF1A1P68104 462 aaKnown RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 SIRPAP78324 504 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 IRF9Q00978 393 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 LTB4RQ15722 352 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 BCL2A1Q16548 175 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 HMBOX1Q6NT76 420 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 SH2D5Q6ZV89 423 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CENPLQ8N0S6 344 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 LILRB1Q8NHL6 650 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 ZNF681Q96N22 645 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 SFXN2Q96NB2 322 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 CPNE1Q99829 537 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 MRPL1Q9BYD6 325 aaKnown RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 RTN4RQ9BZR6 473 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 ACBD3Q9H3P7 528 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 WDR41Q9HAD4 459 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 ELOVL5Q9NYP7 299 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 BCAP29Q9UHQ4 241 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
UBR4-213ENST00000483922 SNX24Q9Y343 169 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 ZNF337Q9Y3M9 751 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 PCDHA9Q9Y5H5 950 aa11.61□□□□□ -0.55
UBR4-213ENST00000483922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.6□□□□□ -0.55
UBR4-213ENST00000483922 HMX2A2RU54 273 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 OR6C70A6NIJ9 312 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 RNF223E7ERA6 249 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 OR7A17O14581 309 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 ACOX3O15254 700 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 S100BP04271 92 aaPredicted RBP11.6□□□□□ -0.55
UBR4-213ENST00000483922 ATP1B1P05026 303 aa11.6□□□□□ -0.55
UBR4-213ENST00000483922 GP5P40197 560 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms