RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 HMGCS1Q01581 520 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 FBXL19-AS1Q494R0 122 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 ZNF628Q5EBL2 1059 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 TIFABQ6ZNK6 161 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 TAOK1Q7L7X3 1001 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 LINC01560Q8TB33 94 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 TMBIM1Q969X1 311 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 HSPBAP1Q96EW2 488 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 KCNA7Q96RP8 456 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 TUBA1CQ9BQE3 449 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 G6PC3Q9BUM1 346 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 ZNF629Q9UEG4 869 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-221ENST00000483778 FETUBQ9UGM5 382 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 UTS2RQ9UKP6 389 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 NFU1Q9UMS0 254 aa16.4■□□□□ 0.22
ATG4B-221ENST00000483778 EXO1Q9UQ84 846 aaKnown RBP16.4■□□□□ 0.22
ATG4B-221ENST00000483778 ZNF469Q96JG9 3925 aaPredicted RBP16.39■□□□□ 0.22
ATG4B-221ENST00000483778 NIPBLQ6KC79 2804 aaeCLIP16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CD8B2A6NJW9 211 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 TO15178 435 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 IL2RAP01589 272 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 FAM153BP0C7A2 387 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CT45A8P0DMV1 189 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CT45A9P0DMV2 189 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CD1EP15812 388 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 TRA2BP62995 288 aaKnown RBP16.39■□□□□ 0.21
ATG4B-221ENST00000483778 BTKQ06187 659 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 PLCXD2Q0VAA5 305 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 FAM153CQ494X1 144 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CT45A2Q5DJT8 189 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 OR5M10Q6IEU7 315 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 SLC30A6Q6NXT4 461 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 TMEM81Q6P7N7 255 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 NPSR1Q6W5P4 371 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 GPRIN3Q6ZVF9 776 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CDC20BQ86Y33 519 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 TRIM42Q8IWZ5 723 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 PM20D2Q8IYS1 436 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 OR9A2Q8NGT5 310 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 C16orf78Q8WTQ4 265 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
ATG4B-221ENST00000483778 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 OSBPL11Q9BXB4 747 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 TSPYL1Q9H0U9 437 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 CLEC4MQ9H2X3 399 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-221ENST00000483778 SLC24A3Q9HC58 644 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 FBXL2Q9UKC9 423 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 PSME2Q9UL46 239 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 ZNF780BQ9Y6R6 833 aa16.39■□□□□ 0.21
ATG4B-221ENST00000483778 EXOC1LA0A1B0GW35 172 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 MBD3L4A6NDZ8 208 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 MBD3L3A6NE82 208 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 PRAMEF25A6NGN4 478 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 MBD3L5A6NJ08 208 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 A6NNC1 897 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 UBFD1O14562 309 aaKnown RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 ACOX3O15254 700 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 TSPAN2O60636 221 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 DIAPH2O60879 1101 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 REM1O75628 298 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 ESRRBO95718 433 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 IMPDH1P20839 514 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 TCEA1P23193 301 aaKnown RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 CTSSP25774 331 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 RPP38P78345 283 aaKnown RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 SRYQ05066 204 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 FLYWCH1Q4VC44 716 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 MBD3L2Q8NHZ7 208 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 METTL6Q8TCB7 284 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 C11orf24Q96F05 449 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-221ENST00000483778 ADOQ96SZ5 270 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 FAIM2Q9BWQ8 316 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 EBPLQ9BY08 206 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 CALHM2Q9HA72 323 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 ST6GALNAC2Q9UJ37 374 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 MCM8Q9UJA3 840 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 CFL2Q9Y281 166 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 PLEKHA6Q9Y2H5 1048 aa16.38■□□□□ 0.21
ATG4B-221ENST00000483778 HEATR5AQ86XA9 2040 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 FRG2CA6NGY1 282 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 PCDH7O60245 1069 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 ZIC3O60481 467 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 ULK1O75385 1050 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 KRT6AP02538 564 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 KRT6BP04259 564 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 CPN1P15169 458 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 TACR1P25103 407 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 KRT6CP48668 564 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 PRKAA2P54646 552 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 FOXA1P55317 472 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 CSTF3Q12996 717 aaKnown RBP16.37■□□□□ 0.21
ATG4B-221ENST00000483778 RASA2Q15283 850 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 CEBPEQ15744 281 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 OR7G2Q8NG99 324 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 ZPLD1Q8TCW7 415 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 ZNF675Q8TD23 568 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 FAM222BQ8WU58 562 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 COL21A1Q96P44 957 aa16.37■□□□□ 0.21
ATG4B-221ENST00000483778 TMUB1Q9BVT8 246 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms