RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 ZIK1Q3SY52 487 aaPredicted RBP13.11□□□□□ -0.31
CLK3-204ENST00000483723 GPAT3Q53EU6 434 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 TTC23Q5W5X9 447 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 TCTN3Q6NUS6 607 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 OR4D9Q8NGE8 314 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 OR4D11Q8NGI4 311 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 DHRS1Q96LJ7 313 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 SAP130Q9H0E3 1048 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 LRRN3Q9H3W5 708 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 SOX17Q9H6I2 414 aaPredicted RBP13.11□□□□□ -0.31
CLK3-204ENST00000483723 DUSP22Q9NRW4 184 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 LANCL2Q9NS86 450 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 ACAD8Q9UKU7 415 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 CDC14AQ9UNH5 594 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 J3KTA2 159 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SYT5O00445 386 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 FFAR1O14842 300 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 HS6ST1O60243 411 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SEMA7AO75326 666 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 JRKO75564 520 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 CKMT1AP12532 417 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 AVPR2P30518 371 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 STT3AP46977 705 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SLC13A2Q13183 592 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 DUSP8Q13202 625 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 ERV3-1Q14264 604 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 C16orf62Q7Z3J2 963 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 WDR53Q7Z5U6 358 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 COMTD1Q86VU5 262 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 CDS1Q92903 461 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 FBXL20Q96IG2 436 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 OR1F2PQ96R84 312 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SDF2Q99470 211 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 ADAP2Q9NPF8 381 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 ATXN7L1Q9ULK2 861 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 SATB2Q9UPW6 733 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 FAM32AQ9Y421 112 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 TESMINQ9Y4I5 508 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 MMACHCQ9Y4U1 282 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 H3BNH8 94 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 DSCR3O14972 297 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 OR10H2O60403 315 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 NKX2-2O95096 273 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 GUSBP08236 651 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 ALOX5P09917 674 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 ITGAMP11215 1152 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 YAP1P46937 504 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 PDX1P52945 283 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 STX4Q12846 297 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 KRT80Q6KB66 452 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 DHRS4L2Q6PKH6 230 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 GALNT12Q8IXK2 581 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 GPR135Q8IZ08 494 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 VWA5B2Q8N398 1253 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 GIPC3Q8TF64 312 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 PMM1Q92871 262 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 ZG16BQ96DA0 208 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 RBM18Q96H35 190 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 LOXL4Q96JB6 756 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 PELOQ9BRX2 385 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 LMF2Q9BU23 707 aaKnown RBP13.1□□□□□ -0.31
CLK3-204ENST00000483723 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 FGF21Q9NSA1 209 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 CHST2Q9Y4C5 530 aa13.1□□□□□ -0.31
CLK3-204ENST00000483723 FCMRO60667 390 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 COQ9O75208 318 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 CLIC3O95833 236 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 AK1P00568 194 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 ALPPP05187 535 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
CLK3-204ENST00000483723 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 IGFBP5P24593 272 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 OR1D4P47884 311 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 EMDP50402 254 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 SPIBQ01892 262 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 FUT7Q11130 342 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 DSG2Q14126 1118 aa13.09□□□□□ -0.31
CLK3-204ENST00000483723 ANGPT1Q15389 498 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms