RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RASGRF2O14827 1237 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 CFLARO15519 480 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 BCL2L11O43521 198 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 SDC3O75056 442 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 KBTBD11O94819 623 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 IGSF6O95976 241 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 DNAJB1P25685 340 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 HMGCLP35914 325 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 CD86P42081 329 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 TAF6P49848 677 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 SMC1AQ14683 1233 aaKnown RBP4.39□□□□□ -1.71
SF3B1-210ENST00000482158 LDLRAP1Q5SW96 308 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 SEL1L3Q68CR1 1132 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 CDC20BQ86Y33 519 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 CCDC36Q8IYA8 594 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 MCHR2Q969V1 340 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 SLC25A36Q96CQ1 311 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 PIWIL1Q96J94 861 aaKnown RBP4.39□□□□□ -1.71
SF3B1-210ENST00000482158 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 NGBQ9NPG2 151 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 BCAP29Q9UHQ4 241 aa4.39□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF490Q9ULM2 529 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-210ENST00000482158 TRAV9-2A0A087WT02 112 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 A0A0J9YVX5 310 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 LRIT2A6NDA9 550 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 E9PMD0 336 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 SGK494L7N484 410 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 SAP18O00422 153 aaKnown RBP4.38□□□□□ -1.71
SF3B1-210ENST00000482158 LRRTM2O43300 516 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 TYROBPO43914 113 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 GPRIN2O60269 458 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 SRPX2O60687 465 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-210ENST00000482158 NDUFA7O95182 113 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 NUDT14O95848 222 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 GSTA1P08263 222 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 RALAP11233 206 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 CHRNA3P32297 505 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 PTGER3P43115 390 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 PARP6Q2NL67 630 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 C15orf32Q32M92 178 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 HIGD2BQ4VC39 106 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 CCDC92Q53HC0 331 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-210ENST00000482158 MS4A13Q5J8X5 152 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 IRGCQ6NXR0 463 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF600Q6ZNG1 722 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 SYVN1Q86TM6 617 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 ERC1Q8IUD2 1116 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 SLC22A18ASQ8N1D0 253 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF671Q8TAW3 534 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
SF3B1-210ENST00000482158 TRIM9Q9C026 710 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 ROPN1Q9HAT0 212 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-210ENST00000482158 FAM114A2Q9NRY5 505 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 P2RX2Q9UBL9 471 aa4.38□□□□□ -1.71
SF3B1-210ENST00000482158 A0A1W2PQ72 361 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 CYSRT1A8MQ03 144 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 C19orf81C9J6K1 198 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 E9PAM4 449 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 H0YL77 283 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 PIGRP01833 764 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 GHRP10912 638 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 IGFBP5P24593 272 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 ASMTP46597 345 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 BRCC3P46736 316 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 RAET1GQ6H3X3 334 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 PRR5LQ6MZQ0 368 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 LEG1Q6P5S2 330 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 ARL14Q8N4G2 192 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 OR52J3Q8NH60 311 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 FNDC8Q8TC99 324 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 C11orf24Q96F05 449 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-210ENST00000482158 MCCC1Q96RQ3 725 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-210ENST00000482158 TSPAN18Q96SJ8 248 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 HOOK1Q9UJC3 728 aaKnown RBP4.37□□□□□ -1.71
SF3B1-210ENST00000482158 FKBP7Q9Y680 259 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 ABCC4O15439 1325 aa4.37□□□□□ -1.71
SF3B1-210ENST00000482158 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 FBLL1A6NHQ2 334 aaKnown RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 PDXKO00764 312 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 APBB3O95704 486 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 HMGCS2P54868 508 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 TRA2BP62995 288 aaKnown RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 HERVK_113P63132 956 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ERVK-8P63133 956 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 MRPS6P82932 125 aaKnown RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ZP4Q12836 540 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 CRMP1Q14194 572 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 RFTN1Q14699 578 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 SLC1A5Q15758 541 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF774Q6NX45 483 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 PNCKQ6P2M8 343 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF562Q6V9R5 426 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 HACD2Q6Y1H2 254 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 NAXDQ8IW45 347 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 BCORP1Q8N888 145 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms