RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CIARTQ8N365 385 aaPredicted RBP4.21□□□□□ -1.74
CKS1B-207ENST00000477676 OTUD6BQ8N6M0 293 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 FITM2Q8N6M3 262 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 HORMAD2Q8N7B1 307 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PSD4Q8NDX1 1056 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 B3GNT7Q8NFL0 401 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 NT5CQ8TCD5 201 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 CREB3L4Q8TEY5 395 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 EEF1AKMT1Q8WVE0 214 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 NCLNQ969V3 563 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PDLIM2Q96JY6 352 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 EBNA1BP2Q99848 306 aaKnown RBP4.21□□□□□ -1.74
CKS1B-207ENST00000477676 SH3GL2Q99962 352 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 DESI2Q9BSY9 194 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 POLDIP3Q9BY77 421 aaKnown RBP4.21□□□□□ -1.74
CKS1B-207ENST00000477676 DEFB126Q9BYW3 111 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 TTTY12Q9BZ98 90 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 RHBGQ9H310 441 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PLEKHF2Q9H8W4 249 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PLAC1Q9HBJ0 212 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PROK2Q9HC23 129 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 DMRT3Q9NQL9 472 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 CCDC177Q9NQR7 707 aaPredicted RBP4.21□□□□□ -1.74
CKS1B-207ENST00000477676 PAK5Q9P286 719 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 DRG1Q9Y295 367 aaKnown RBP4.21□□□□□ -1.74
CKS1B-207ENST00000477676 MALRD1Q5VYJ5 2156 aa4.21□□□□□ -1.74
CKS1B-207ENST00000477676 TRBC2A0A5B9 178 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 LRRC3CA6NJW4 275 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 A6NNC1 897 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 USP27XA6NNY8 438 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 MIF4GDA9UHW6 222 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 E5RI56 91 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 E7EVH7 732 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 KLRC4-KLRK1H3BQV0 150 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 WWP2O00308 870 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SYT5O00445 386 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 OR1F1O43749 312 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ZBTB14O43829 449 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 OR2J2O76002 312 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PRKD3O94806 890 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ZFPL1O95159 310 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 LY6G6DO95868 133 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 GAS8O95995 478 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TUBB4AP04350 444 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SERPIND1P05546 499 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CCL3P10147 92 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TPSB2P20231 275 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 IL10P22301 178 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 HRH2P25021 359 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 HNRNPH1P31943 449 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ANP32AP39687 249 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CETN2P41208 172 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 HNF4AP41235 474 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 MAGEA3P43357 314 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 MAGEA6P43360 314 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ZFP36L2P47974 494 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 DNASE1L1P49184 302 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 NAP1L1P55209 391 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CDKN2DP55273 166 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 BASP1P80723 227 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 REEP5Q00765 189 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 HERC3Q15034 1050 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TRIP13Q15645 432 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TPSAB1Q15661 275 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CCNG2Q16589 344 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 C18orf21Q32NC0 220 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 FAM153CQ494X1 144 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ADNP2Q6IQ32 1131 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF529Q6P280 563 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 LCTLQ6UWM7 567 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PAMR1Q6UXH9 720 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 IL20RBQ6UXL0 311 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 B3GNT6Q6ZMB0 384 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SDCCAG8Q86SQ7 713 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CLYBLQ8N0X4 340 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 LNX2Q8N448 690 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 UBL4BQ8N7F7 174 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CHDHQ8NE62 594 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 OR10Q1Q8NGQ4 319 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 OR56A3Q8NH54 315 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 MCOLN3Q8TDD5 553 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PTPMT1Q8WUK0 201 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 KCNJ9Q92806 393 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 NEIL2Q969S2 332 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 KIAA1191Q96A73 305 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TMEM125Q96AQ2 219 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SNF8Q96H20 258 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TSNARE1Q96NA8 513 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 QRFPRQ96P65 431 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PANX2Q96RD6 677 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 RASL10BQ96S79 203 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SMC6Q96SB8 1091 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 CSF3RQ99062 836 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 NEU1Q99519 415 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 NDNQ99608 321 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ANP32EQ9BTT0 268 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 MANSC1Q9H8J5 431 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 SH2D2AQ9NP31 389 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PNO1Q9NRX1 252 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 INTS10Q9NVR2 710 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms