RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CDH3P22223 829 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 POLR2IP36954 125 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 OR1E2P47887 323 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 MAPK14Q16539 360 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CT45A2Q5DJT8 189 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 RNF220Q5VTB9 566 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ZAR1Q86SH2 424 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF347Q96SE7 839 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 PINK1Q9BXM7 581 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 A0A1W2PRQ8 180 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 BRINP1O60477 761 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CNOT3O75175 753 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 DDAH2O95865 285 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 THRBP10828 461 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 HSD17B7P56937 341 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 BTG2P78543 158 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 MAT1AQ00266 395 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 KCNC4Q03721 635 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 FHL1Q13642 323 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 DGCR6Q14129 220 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 YOD1Q5VVQ6 348 aaPredicted RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 PMM1Q92871 262 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 VPS50Q96JG6 964 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 AGAP5A6NIR3 686 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 VSTM2BA6NLU5 285 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CLIC3O95833 236 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 THBS1P07996 1170 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CHRNEQ04844 493 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 PPP1R8Q12972 351 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 LASP1Q14847 261 aaKnown RBP11.29□□□□□ -0.6
PRPF39-203ENST00000477626 MLIPQ5VWP3 458 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 SMYD1Q8NB12 490 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CDS1Q92903 461 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 PDE7BQ9NP56 450 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ADPRHL2Q9NX46 363 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 GMEB2Q9UKD1 530 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF780BQ9Y6R6 833 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 RRM2P31350 389 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 DSG2Q14126 1118 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 CYP27C1Q4G0S4 372 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF721Q8TF20 911 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ADIPOR1Q96A54 375 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 MUS81Q96NY9 551 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 GPA33Q99795 319 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 LIPT1Q9Y234 373 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PCDH17O14917 1159 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 DSCR3O14972 297 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ERAL1O75616 437 aaKnown RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF10P21506 573 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PCMT1P22061 227 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PRR5P85299 388 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 KCNAB2Q13303 367 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 MAP7Q14244 749 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 NR0B2Q15466 257 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 XAF1Q6GPH4 301 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 WDR53Q7Z5U6 358 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PLXDC1Q8IUK5 500 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 NCLNQ969V3 563 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 HRASLS5Q96KN8 279 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 QRSL1Q9H0R6 528 aaKnown RBP11.28□□□□□ -0.6
PRPF39-203ENST00000477626 POLE3Q9NRF9 147 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 SUSD2Q9UGT4 822 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 PCDHGA6Q9Y5G7 932 aa11.28□□□□□ -0.6
PRPF39-203ENST00000477626 TRBV4-1A0A0J9YWV2 114 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 ARHGAP33O14559 1287 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 DUX1O43812 170 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 CPNE6O95741 557 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 ADRA2AP08913 450 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.6
PRPF39-203ENST00000477626 ACP1P24666 158 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 SOAT1P35610 550 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.6
PRPF39-203ENST00000477626 CCL7P80098 99 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 LSM11P83369 360 aaKnown RBP eCLIP11.27□□□□□ -0.66e-6■□□□□ 8.3
PRPF39-203ENST00000477626 IL18R1Q13478 541 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 LAPTM4AQ15012 233 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 ZDHHC13Q8IUH4 622 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 OR6T1Q8NGN1 323 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 NCSTNQ92542 709 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms