RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TMBIM1Q969X1 311 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 KLHL29Q96CT2 875 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 HSPBAP1Q96EW2 488 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 LCORQ96JN0 433 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 VSTM2LQ96N03 204 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 KCNA7Q96RP8 456 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TRIB1Q96RU8 372 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF382Q96SR6 550 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 POLDIP3Q9BY77 421 aaKnown RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TXLNGYQ9BZA5 131 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 CALHM2Q9HA72 323 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TNFRSF12AQ9NP84 129 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 SERHLQ9NQF3 203 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 CCM2LQ9NUG4 571 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 VPS29Q9UBQ0 182 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 MTRF1LQ9UGC7 380 aaKnown RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 BCAP29Q9UHQ4 241 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 FBXL2Q9UKC9 423 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 NFU1Q9UMS0 254 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 SNX6Q9UNH7 406 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 EXO1Q9UQ84 846 aaKnown RBP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 CAMK2AQ9UQM7 478 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 DLGAP4Q9Y2H0 992 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 TIMM22Q9Y584 194 aa6.39□□□□□ -1.39
HDAC3-207ENST00000475549 NIPBLQ6KC79 2804 aaeCLIP6.39□□□□□ -1.39
HDAC3-207ENST00000475549 A0A087WUV0 522 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 A0A1W2PPR1 153 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 GOLGA6L10A6NI86 522 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CD8B2A6NJW9 211 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 A6NNC1 897 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 FAM47E-STBD1D6RA91 191 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 G3V2L1 256 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 GOLGA8RI6L899 631 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 DVL2O14641 736 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ACOX3O15254 700 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 RIPK2O43353 540 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TSPAN2O60636 221 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ULK1O75385 1050 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CBR3O75828 277 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TGM6O95932 706 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 IL2RAP01589 272 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 IL3P08700 152 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CPN1P15169 458 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CTSSP25774 331 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 DEKP35659 375 aaKnown RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ALDH9A1P49189 494 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TMED10P49755 219 aaKnown RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 LHX2P50458 406 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CLDN15P56746 228 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 B3GALT5-AS1P59052 145 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 SRYQ05066 204 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 SNTA1Q13424 505 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TOMM20Q15388 145 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 GLE1Q53GS7 698 aaKnown RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 OR5M10Q6IEU7 315 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 GALNT18Q6P9A2 607 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 SCIMPQ6UWF3 145 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CDC20BQ86Y33 519 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 OR7G2Q8NG99 324 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 RDH11Q8TC12 318 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 METTL6Q8TCB7 284 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF675Q8TD23 568 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 C16orf78Q8WTQ4 265 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF592Q92610 1267 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 RNASE6Q93091 150 aaKnown RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 EXOSC8Q96B26 276 aaKnown RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 L3HYPDHQ96EM0 354 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 SLC35A4Q96G79 324 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 BTBD9Q96Q07 612 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 UCN2Q96RP3 112 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ADOQ96SZ5 270 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 FOXC2Q99958 501 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TUBA1CQ9BQE3 449 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 OR2B2Q9GZK3 357 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 TSPYL1Q9H0U9 437 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-207ENST00000475549 METTL7AQ9H8H3 244 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 PLEKHF2Q9H8W4 249 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 SIRT5Q9NXA8 310 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 FLRT3Q9NZU0 649 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 ST6GALNAC2Q9UJ37 374 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 EMCNQ9ULC0 261 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 MAPRE3Q9UPY8 281 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 PLEKHA6Q9Y2H5 1048 aa6.38□□□□□ -1.39
HDAC3-207ENST00000475549 PRRC2AP48634 2157 aaKnown RBP6.37□□□□□ -1.39
HDAC3-207ENST00000475549 EXOC1LA0A1B0GW35 172 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 A0A1W2PPM1 405 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 PRAMEF25A6NGN4 478 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 TUBAL3A6NHL2 446 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 OR6C70A6NIJ9 312 aa6.37□□□□□ -1.39
HDAC3-207ENST00000475549 MYO1GB0I1T2 1018 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms