RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 OTX2P32243 289 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 RFX3P48380 749 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 ERFP50548 548 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CLCN2P51788 898 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 NRG3P56975 720 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 DCAF7P61962 342 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 PSPHP78330 225 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 MRPS22P82650 360 aaKnown RBP9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CHRNB3Q05901 458 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 EXT1Q16394 746 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 LANCL3Q6ZV70 420 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 FKBP9P1Q75LS8 142 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 LAPTM4BQ86VI4 370 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CALHM3Q86XJ0 350 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 GOLM1Q8NBJ4 401 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 OR5L2Q8NGL0 311 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SPPL2AQ8TCT8 520 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CDS1Q92903 461 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 MAL2Q969L2 176 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 OTUB1Q96FW1 271 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 VMP1Q96GC9 406 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 TMEM19Q96HH6 336 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SENP5Q96HI0 755 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SPSB2Q99619 263 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 G6PC3Q9BUM1 346 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 NRSN2Q9GZP1 204 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 PIGUQ9H490 435 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 EPS8L2Q9H6S3 715 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 ANKRA2Q9H9E1 313 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 GPN2Q9H9Y4 310 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 DUSP22Q9NRW4 184 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 GPATCH2Q9NW75 528 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 NTMQ9P121 344 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SEC14L3Q9UDX4 400 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 ANAPC2Q9UJX6 822 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 EP300Q09472 2414 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 FER1L5A0AVI2 2057 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 A0A0G2JPF8 293 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 DCDC2BA2VCK2 349 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PMS2P1A4D2B8 440 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 A8MUI8 341 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 HNRNPCL2B2RXH8 293 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 HNRNPCL3B7ZW38 293 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 H0Y3Z8 333 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 SUV39H1O43463 412 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 ENTPD5O75356 428 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 TNFRSF21O75509 655 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 STX11O75558 287 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 SEC24DO94855 1032 aaPredicted RBP9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 SORBS2O94875 1100 aaKnown RBP9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 CBX7O95931 251 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 RECKO95980 971 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 ALPPP05187 535 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 HNRNPCL4P0DMR1 293 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 FCGR1AP12314 374 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 BMP2P12643 396 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 ICAM2P13598 275 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 HPGDP15428 266 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 IL12BP29460 328 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 GABRA3P34903 492 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 STAT5AP42229 794 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 FUT7Q11130 342 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 FOXC1Q12948 553 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 SSPNQ14714 243 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 DECR1Q16698 335 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 BTBD16Q32M84 506 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 DCST2Q5T1A1 773 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 FHL5Q5TD97 284 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 IRAK1BP1Q5VVH5 260 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PRAMEF8Q5VWM4 474 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PRAMEF7Q5VXH5 474 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 LCN10Q6JVE6 187 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 HSDL2Q6YN16 418 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 ARMC8Q8IUR7 673 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PEX5LQ8IYB4 626 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 B3GNT7Q8NFL0 401 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 OR1N1Q8NGS0 311 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 C16orf52Q8NHV5 167 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PTPMT1Q8WUK0 201 aaPredicted RBP9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 WDR60Q8WVS4 1066 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 PROX1Q92786 737 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC47A1Q96FL8 570 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 RMND5BQ96G75 393 aaPredicted RBP9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 C16orf58Q96GQ5 468 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 TPD52L3Q96J77 140 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 IP6K3Q96PC2 410 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 TRNT1Q96Q11 434 aaKnown RBP9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 BTBD2Q9BX70 525 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 DCLRE1BQ9H816 532 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 GORASP2Q9H8Y8 452 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 GIN1Q9NXP7 522 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 KLHL28Q9NXS3 571 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 TCFL5Q9UL49 500 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF232Q9UNY5 417 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 WDR45Q9Y484 360 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 NEUROG3Q9Y4Z2 214 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 V9GYQ6 96 aa9.56□□□□□ -0.88
PRPF38A-202ENST00000474048 DNAH14Q0VDD8 3507 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms