RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MAT2AP31153 395 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 UGT1A3P35503 534 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ACVR1BP36896 505 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ACADSBP45954 432 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 POU3F4P49335 361 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SLC26A2P50443 739 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SNU13P55769 128 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 UCP2P55851 309 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 HERV-K104P63124 156 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ASIC1P78348 528 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 EBI3Q14213 229 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GK2Q14410 553 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SMC1AQ14683 1233 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 PRR4Q16378 134 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SGCBQ16585 318 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SHROOM1Q2M3G4 852 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TYSND1Q2T9J0 566 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 IFI44LQ53G44 452 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 LGSNQ5TDP6 509 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 AGBL2Q5U5Z8 902 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 UFSP1Q6NVU6 142 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 IRGCQ6NXR0 463 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 IL34Q6ZMJ4 242 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GALNTL5Q7Z4T8 443 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TSEN54Q7Z6J9 526 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TMEM179BQ7Z7N9 219 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 C9orf40Q8IXQ3 194 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SYCP3Q8IZU3 236 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 PYROXD2Q8N2H3 581 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF433Q8N7K0 673 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 LINC01555Q8NAE3 123 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SIDT2Q8NBJ9 832 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 OR4F17Q8NGA8 305 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 OR4A16Q8NH70 328 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 RAB39BQ96DA2 213 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SLC25A38Q96DW6 304 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 C11orf24Q96F05 449 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 DHTKD1Q96HY7 919 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SPATA17Q96L03 361 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ZMAT2Q96NC0 199 aaKnown RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 OR4F4Q96R69 305 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 APOOQ9BUR5 198 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TM2D1Q9BX74 207 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TSSK1BQ9BXA7 367 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 SLC25A39Q9BZJ4 359 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 TSPYL1Q9H0U9 437 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 CARD9Q9H257 536 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 GANQ9H2C0 597 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 Q9H3A6 140 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 EHD1Q9H4M9 534 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ABCB8Q9NUT2 735 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 CNIH4Q9P003 139 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 NARFQ9UHQ1 456 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 NRBP1Q9UHY1 535 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 LEF1Q9UJU2 399 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF221Q9UK13 617 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 FOXA2Q9Y261 457 aaPredicted RBP0.88□□□□□ -2.27
UBXN4-207ENST00000471246 PCM1Q15154 2024 aa0.88□□□□□ -2.27
UBXN4-207ENST00000471246 IGKV6-21A0A0C4DH24 114 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 TCP11X1B4DZS4 312 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 C11orf98E9PRG8 122 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SLC28A1O00337 649 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 EEF2KO00418 725 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 EI24O14681 340 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 PSMA7O14818 248 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 MAGEB4O15481 346 aaPredicted RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 CFLARO15519 480 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 LATO43561 262 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 DFNA5O60443 496 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 CA11O75493 328 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 NOL4O94818 638 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 HOXB7P09629 217 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 H2AFZP0C0S5 128 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 UROSP10746 265 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 VCLP18206 1134 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SDC1P18827 310 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 FCARP24071 287 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 RBMXP38159 391 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 PPOXP50336 477 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SERPINH1P50454 418 aaKnown RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SMSP52788 366 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 METAP1P53582 386 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 KRTAP10-10P60014 251 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 LRRC63Q05C16 580 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 PUDPQ08623 228 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 ORC2Q13416 577 aaPredicted RBP0.87□□□□□ -2.27
UBXN4-207ENST00000471246 IL18R1Q13478 541 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF528Q3MIS6 628 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 GPAT3Q53EU6 434 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 NKAIN2Q5VXU1 208 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 MEDAGQ5VYS4 303 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 KCTD9Q7L273 389 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 OR8H3Q8N146 312 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 CHCHD4Q8N4Q1 142 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 BBS1Q8NFJ9 593 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 OR10H4Q8NGA5 316 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 OR52J3Q8NH60 311 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 FIBINQ8TAL6 211 aa0.87□□□□□ -2.27
UBXN4-207ENST00000471246 SRSF12Q8WXF0 261 aaKnown RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms