RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM41AQ96HV5 264 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 TREX2Q9BQ50 279 aaPredicted RBP17.48■□□□□ 0.39
COL7A1-207ENST00000467985 SLC6A15Q9H2J7 730 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 ACBD3Q9H3P7 528 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 SLC35C2Q9NQQ7 365 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 SPRR3Q9UBC9 169 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 TNFRSF10DQ9UBN6 386 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 C15orf41Q9Y2V0 281 aa17.48■□□□□ 0.39
COL7A1-207ENST00000467985 NCKAP5O14513 1909 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 FRG2CA6NGY1 282 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 TO15178 435 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 RGS16O15492 202 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 TRAPPC6AO75865 159 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 HPNP05981 417 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 SOX18P35713 384 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 BTKQ06187 659 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 CEBPEQ15744 281 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 NNATQ16517 81 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 RTL6Q6ICC9 239 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 SLC30A6Q6NXT4 461 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 FAM180BQ6P0A1 224 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 MEX3BQ6ZN04 569 aaKnown RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 CCDC71Q8IV32 467 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 HOMEZQ8IX15 550 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 GOLGA6L1Q8N7Z2 621 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 ZBTB9Q96C00 473 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 C14orf79Q96F83 325 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 METTL2AQ96IZ6 378 aaKnown RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 BTBD9Q96Q07 612 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 EBPLQ9BY08 206 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 UBQLN3Q9H347 655 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 ALKBH4Q9NXW9 302 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 SENP1Q9P0U3 644 aa17.47■□□□□ 0.39
COL7A1-207ENST00000467985 GPR55Q9Y2T6 319 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 ANKRD17O75179 2603 aaKnown RBP17.47■□□□□ 0.39
COL7A1-207ENST00000467985 C15orf38-AP3S2A0A0A6YYH1 394 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 FAM90A27PA6NNH2 459 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 ABCB7O75027 752 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 RSL1D1O76021 490 aaKnown RBP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 TOXO94900 526 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SLITRK5O94991 958 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 MYZAPP0CAP1 466 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 UROSP10746 265 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 DDCP20711 480 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 ZFP36L2P47974 494 aaKnown RBP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 TRPC1P48995 793 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 CDK9P50750 372 aaKnown RBP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 FOXA1P55317 472 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SLC18A2Q05940 514 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SF3B4Q15427 424 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 LIPMQ5VYY2 423 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 TIGD3Q6B0B8 471 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SCIMPQ6UWF3 145 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 ULK2Q8IYT8 1036 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 FAM9CQ8IZT9 166 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 ZNF295-AS1Q8N0V1 137 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SIMC1Q8NDZ2 872 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 OR9A2Q8NGT5 310 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 HGDQ93099 445 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 NTNG2Q96CW9 530 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 GNRHR2Q96P88 292 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 BBS4Q96RK4 519 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 TMEM109Q9BVC6 243 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 STMN4Q9H169 189 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-207ENST00000467985 SLC24A3Q9HC58 644 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 MIEF1Q9NQG6 463 aa17.46■□□□□ 0.39
COL7A1-207ENST00000467985 NKX2-6A6NCS4 301 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 OR6C70A6NIJ9 312 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 AHRRA9YTQ3 701 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 DYNC1I1O14576 645 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 PLOD3O60568 738 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 IGFBP2P18065 325 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 TFF3Q07654 80 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 C2orf80Q0P641 193 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 RIPPLY2Q5TAB7 128 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 FNDC7Q5VTL7 733 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 IKBIPQ70UQ0 350 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 PM20D2Q8IYS1 436 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 OR1J4Q8NGS1 313 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 KAT2AQ92830 837 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 TMCO6Q96DC7 493 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 DTNBP1Q96EV8 351 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 LURAP1Q96LR2 239 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 COL21A1Q96P44 957 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 TRMOQ9BU70 441 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 OSBPL11Q9BXB4 747 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 UCK2Q9BZX2 261 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 MYNNQ9NPC7 610 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 TAS2R9Q9NYW1 312 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 TAS2R7Q9NYW3 318 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 KLRF1Q9NZS2 232 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 CELSR1Q9NYQ6 3014 aa17.45■□□□□ 0.38
COL7A1-207ENST00000467985 A0A0G2JNJ9 132 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 ICOSLGO75144 302 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 MSX1P28360 303 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 GCKP35557 465 aa17.44■□□□□ 0.38
COL7A1-207ENST00000467985 TOMM20Q15388 145 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms