RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RPS27LQ71UM5 84 aaKnown RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 SLC22A16Q86VW1 577 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 TUBA1CQ9BQE3 449 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 SLC17A9Q9BYT1 436 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 DYNLRB1Q9NP97 96 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PAK1IP1Q9NWT1 392 aaPredicted RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 B3GNT2Q9NY97 397 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 HTR3BO95264 441 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 VIPR2P41587 438 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 HSD17B7P56937 341 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PPP1R8Q12972 351 aaKnown RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 ZFAND4Q86XD8 727 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 PRR18Q8N4B5 295 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 OR6Q1Q8NGQ2 317 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 RPLP0P6Q8NHW5 317 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 ZNF675Q8TD23 568 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 RHBDF1Q96CC6 855 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 METTL2AQ96IZ6 378 aaKnown RBP8.29□□□□□ -1.08
HPS4-209ENST00000466781 IL17FQ96PD4 163 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 GPR160Q9UJ42 338 aa8.29□□□□□ -1.08
HPS4-209ENST00000466781 RTCAO00442 366 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 MAS1P04201 325 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 CKMT2P17540 419 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PRKACGP22612 351 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HNRNPA2B1P22626 353 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 CNPY1Q3B7I2 92 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 ESCO2Q56NI9 601 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 MTFR2Q6P444 385 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR5H2Q8NGV7 314 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 NEIL3Q8TAT5 605 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 F2RL3Q96RI0 385 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PEBP4Q96S96 227 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 NELL2Q99435 816 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 DOHHQ9BU89 302 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PAPPA2Q9BXP8 1791 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 A0A087WUU8 490 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 IGKV6-21A0A0C4DH24 114 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 A0A1W2PPK0 400 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 ZNF840PA6NDX5 716 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SLC22A31A6NKX4 558 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 CD63P08962 238 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 TMEM225BP0DP42 221 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 DLSTP36957 453 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SCGB2A2Q13296 93 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 LAPTM4AQ15012 233 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PIGGQ5H8A4 983 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 C3orf38Q5JPI3 329 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 ATG9BQ674R7 924 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 UNC5DQ6UXZ4 953 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HMGN2P46Q86SG4 172 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR52E2Q8NGJ4 325 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SGCZQ96LD1 299 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 DCBLD2Q96PD2 775 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR5B2Q96R09 309 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SERINC2Q96SA4 455 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SECISBP2Q96T21 854 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 MEPEQ9NQ76 525 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 RLIMQ9NVW2 624 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 LRRC42Q9Y546 428 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PHIPQ8WWQ0 1821 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 H3BML4 177 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OXSR1O95747 527 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 MYH6P13533 1939 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 POU3F2P20265 443 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 SLC2A5P22732 501 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 RAB31Q13636 194 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 MFSD13AQ14CX5 517 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 ERMP1Q7Z2K6 904 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 WDSUB1Q8N9V3 476 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR8J3Q8NGG0 315 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 DOK4Q8TEW6 326 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 C7orf34Q96L11 122 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 NPY6RQ99463 290 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 RBM24Q9BX46 236 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 CAMK2AQ9UQM7 478 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PTRH2Q9Y3E5 179 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 B3GALT1Q9Y5Z6 326 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 EEF1E1O43324 174 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 GABBR2O75899 941 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PNMTP11086 282 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 GCGRP47871 477 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 FNTBP49356 437 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 DAP3P51398 398 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 TAS2R38P59533 333 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 RAB4BP61018 213 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 KLHDC10Q6PID8 442 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HAGHLQ6PII5 290 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 UGT2A3Q6UWM9 527 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PXKQ7Z7A4 578 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR5T1Q8NG75 326 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR51T1Q8NGJ9 327 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 RAB39BQ96DA2 213 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 CDC6Q99741 560 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PKP2Q99959 881 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms