RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 STON2Q8WXE9 905 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 HGDQ93099 445 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 CIDECQ96AQ7 238 aaPredicted RBP8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 SLC35A4Q96G79 324 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 GPR137Q96N19 417 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 FAM173AQ9BQD7 235 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 LMF2Q9BU23 707 aaKnown RBP8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 BHLHE41Q9C0J9 482 aaPredicted RBP8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 CLMPQ9H6B4 373 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 ANKRA2Q9H9E1 313 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 FOLH1BQ9HBA9 442 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 SIRT3Q9NTG7 399 aaPredicted RBP8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 SACM1LQ9NTJ5 587 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATAD3AQ9NVI7 634 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 TAS2R9Q9NYW1 312 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 SH3BP4Q9P0V3 963 aa8.72□□□□□ -1.01
SDCCAG3-208ENST00000466579 NUP214P35658 2090 aaPredicted RBP8.71□□□□□ -1.01
SDCCAG3-208ENST00000466579 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 A0A0G2JMM0 328 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 A0A1W2PPB8 328 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 A0A1W2PRS3 328 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 PINLYPA6NC86 204 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ANKUB1A6NFN9 424 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR6C70A6NIJ9 312 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 KIR3DP1A8MWS1 328 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TP53I11O14683 189 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TSPAN2O60636 221 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 SCN2BO60939 215 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ERN1O75460 977 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 WISP2O76076 250 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TGDSO95455 350 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ALDOCP09972 364 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 MANFP55145 182 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 PSG6Q00889 435 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ALDH6A1Q02252 535 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 SRSF1Q07955 248 aaKnown RBP eCLIP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 MRPL49Q13405 166 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TBCELQ5QJ74 424 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 CPTPQ5TA50 214 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TMEM64Q6YI46 380 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 NUP54Q7Z3B4 507 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 CHERPQ8IWX8 916 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLC34A3Q8N130 599 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 KRTCAP2Q8N6L1 136 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR8J2Q8NGG1 315 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 SPPL2AQ8TCT8 520 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 LRRC8CQ8TDW0 803 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 CKAP2Q8WWK9 683 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 OR5P2Q8WZ92 322 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 TESCQ96BS2 214 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 OMA1Q96E52 524 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 GIMAP5Q96F15 307 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 PRPF18Q99633 342 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ANGPTL4Q9BY76 406 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZDHHC11Q9H8X9 412 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 IL1RL2Q9HB29 575 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 INTS9Q9NV88 658 aaKnown RBP8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 AIG1Q9NVV5 245 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZNF835Q9Y2P0 537 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 NINQ8N4C6 2090 aa8.71□□□□□ -1.02
SDCCAG3-208ENST00000466579 A0A1W2PRB8 838 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 RNASET2O00584 256 aaKnown RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 EMC8O43402 210 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 ATP8B1O43520 1251 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 TRIM3O75382 744 aaPredicted RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 P04436 131 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 STSP08842 583 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZNF24P17028 368 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 EPHA3P29320 983 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 MRPL19P49406 292 aaKnown RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 CDK9P50750 372 aaKnown RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 WNT3P56703 355 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 CORO7P57737 925 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 FBXW4P57775 412 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 GPR85P60893 370 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 RPP38P78345 283 aaKnown RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 GTF3C1Q12789 2109 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 HSPB3Q12988 150 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 SNTA1Q13424 505 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 DPY19L1Q2PZI1 675 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 CYP27C1Q4G0S4 372 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLC9B1Q4ZJI4 515 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 CMPK2Q5EBM0 449 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 ZCCHC12Q6PEW1 402 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 EPGNQ6UW88 154 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 Q6ZPB1 254 aaPredicted RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 GK5Q6ZS86 529 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 CEP70Q8NHQ1 597 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 NUDT8Q8WV74 236 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 PPP1R36Q96LQ0 422 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 MAGEB18Q96M61 343 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 DUSP26Q9BV47 211 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 TTTY12Q9BZ98 90 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 WDR55Q9H6Y2 383 aaPredicted RBP8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 NEUROD4Q9HD90 331 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 SLCO1B3Q9NPD5 702 aa8.7□□□□□ -1.02
SDCCAG3-208ENST00000466579 DDX18Q9NVP1 670 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms