RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 IMP3Q9NV31 184 aaKnown RBP18.61■□□□□ 0.57
SDF4-205ENST00000465727 SLC5A10A0PJK1 596 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 CASC3O15234 703 aaKnown RBP18.6■□□□□ 0.57
SDF4-205ENST00000465727 GREM1O60565 184 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 ATG13O75143 517 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 UBXN7O94888 489 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 ZNF250P15622 560 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 DDCP20711 480 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 ACSL1P33121 698 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 IFNGR2P38484 337 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 SLC6A11P48066 632 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 PITPNBP48739 271 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 CDH11P55287 796 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 RAG2P55895 527 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 BDH1Q02338 343 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 ZNF155Q12901 538 aaPredicted RBP18.6■□□□□ 0.57
SDF4-205ENST00000465727 LMAN2Q12907 356 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 FAM122CQ6P4D5 195 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 FAM83HQ6ZRV2 1179 aaPredicted RBP18.6■□□□□ 0.57
SDF4-205ENST00000465727 OAFQ86UD1 273 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 LHFPL3Q86UP9 236 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 OR11H4Q8NGC9 324 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 ZNF480Q8WV37 535 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 PRRC1Q96M27 445 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 JAM3Q9BX67 310 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 OSGEPL1Q9H4B0 414 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 C12orf4Q9NQ89 552 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 NUDT15Q9NV35 164 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 P2RX2Q9UBL9 471 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 FAM8A1Q9UBU6 413 aa18.6■□□□□ 0.57
SDF4-205ENST00000465727 GTPBP1O00178 669 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 ADAM12O43184 909 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 TSPAN6O43657 245 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 PLXNA2O75051 1894 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 NFATC1O95644 943 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 CD79BP40259 229 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 MANFP55145 182 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 SRP54P61011 504 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 POLR2LP62875 67 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 EXOSC2Q13868 293 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 FGFBP1Q14512 234 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 EOGTQ5NDL2 527 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 MPP7Q5T2T1 576 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 ASB18Q6ZVZ8 466 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 C6orf120Q7Z4R8 191 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 GALNT11Q8NCW6 608 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 RAB8BQ92930 207 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 GPA33Q99795 319 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 TREX2Q9BQ50 279 aaPredicted RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 LIPT1Q9Y234 373 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 TRIM77I1YAP6 450 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 IGHA1P01876 353 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 ENPP1P22413 925 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 SOX9P48436 509 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 CLCNKAP51800 687 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 RPA4Q13156 261 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 PLD1Q13393 1074 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 GALEQ14376 348 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 POU4F3Q15319 338 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 IER5LQ5T953 404 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 BRAT1Q6PJG6 821 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 WFDC6Q9BQY6 131 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 SPATA5L1Q9BVQ7 753 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 SGPP1Q9BX95 441 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 PLA2G12AQ9BZM1 189 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 PPA2Q9H2U2 334 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 LYARQ9NX58 379 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 AHSPQ9NZD4 102 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 ZNF224Q9NZL3 707 aa18.59■□□□□ 0.57
SDF4-205ENST00000465727 EXOGQ9Y2C4 368 aaKnown RBP18.59■□□□□ 0.57
SDF4-205ENST00000465727 LANCL1O43813 399 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 SLC28A2O43868 658 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 ADAMTS4O75173 837 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 RGS9O75916 674 aaPredicted RBP18.58■□□□□ 0.57
SDF4-205ENST00000465727 PREPP48147 710 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 SHC2P98077 582 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 ZNF267Q14586 743 aaPredicted RBP18.58■□□□□ 0.57
SDF4-205ENST00000465727 IDNKQ5T6J7 187 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 PYHIN1Q6K0P9 492 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 C22orf39Q6P5X5 142 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 PRSS42Q7Z5A4 293 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 GPAT4Q86UL3 456 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 GNPDA2Q8TDQ7 276 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 NXPE2Q96DL1 559 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 TEX12Q9BXU0 123 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 ELAC1Q9H777 363 aaKnown RBP18.58■□□□□ 0.57
SDF4-205ENST00000465727 GPR52Q9Y2T5 361 aa18.58■□□□□ 0.57
SDF4-205ENST00000465727 TEX13CA0A0J9YWL9 993 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CIB4A0PJX0 185 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CARNS1A5YM72 827 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CD8B2A6NJW9 211 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CELF2O95319 508 aaKnown RBP18.58■□□□□ 0.56
SDF4-205ENST00000465727 TCRBP04435 133 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CD8BP10966 210 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 CKBP12277 381 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 NPR2P20594 1047 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 PPP2R1BP30154 601 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 PRLHRP49683 370 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 SPDYE7PQ495Y7 208 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms