RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
USP39-212ENST00000465514 TEX10Q9NXF1 929 aaPredicted RBP8.85□□□□□ -0.99
USP39-212ENST00000465514 CPSF2Q9P2I0 782 aaKnown RBP8.85□□□□□ -0.99
USP39-212ENST00000465514 CDC42EP3Q9UKI2 254 aa8.85□□□□□ -0.99
USP39-212ENST00000465514 C15orf41Q9Y2V0 281 aa8.85□□□□□ -0.99
USP39-212ENST00000465514 UTP11Q9Y3A2 253 aaKnown RBP8.85□□□□□ -0.99
USP39-212ENST00000465514 TNPO3Q9Y5L0 923 aaKnown RBP8.85□□□□□ -0.99
USP39-212ENST00000465514 IKBKGQ9Y6K9 419 aa8.85□□□□□ -0.99
USP39-212ENST00000465514 A0A096LPK6 155 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 CCDC189A1A4V9 331 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 HMX2A2RU54 273 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 OR7A17O14581 309 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 GNB5O14775 395 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 CTIFO43310 598 aaKnown RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 ERN1O75460 977 aaKnown RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 KLHL2O95198 593 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 CLDN9O95484 217 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 KLK1P06870 262 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 ABCB1P08183 1280 aaPredicted RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 S1PR1P21453 382 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 NT5EP21589 574 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 ARL1P40616 181 aaPredicted RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 TMED10P49755 219 aaKnown RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 NRG3P56975 720 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 RPP38P78345 283 aaKnown RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 GUCY2DQ02846 1103 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 FREM1Q5H8C1 2179 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 NHSL2Q5HYW2 709 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 DCST1Q5T197 706 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 TIGD3Q6B0B8 471 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 KLC3Q6P597 504 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 BHLHB9Q6PI77 547 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 ZDHHC24Q6UX98 284 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 PLEKHM3Q6ZWE6 761 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 OR7G1Q8NGA0 311 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 TMEM171Q8WVE6 324 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 ABTB1Q969K4 478 aaPredicted RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 ATP6V1E2Q96A05 226 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 SERPINI1Q99574 410 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 UGT2B28Q9BY64 529 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 NOL11Q9H8H0 719 aaKnown RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 ZNF701Q9NV72 531 aaPredicted RBP8.84□□□□□ -0.99
USP39-212ENST00000465514 NDRG3Q9UGV2 375 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 PYCARDQ9ULZ3 195 aa8.84□□□□□ -0.99
USP39-212ENST00000465514 MBD3L3A6NE82 208 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 CD8B2A6NJW9 211 aa8.83□□□□□ -1
USP39-212ENST00000465514 SEMA3DO95025 777 aa8.83□□□□□ -1
USP39-212ENST00000465514 IL18BPO95998 194 aa8.83□□□□□ -1
USP39-212ENST00000465514 CPMP14384 443 aa8.83□□□□□ -1
USP39-212ENST00000465514 PORP16435 677 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 KRT15P19012 456 aa8.83□□□□□ -1
USP39-212ENST00000465514 GPX3P22352 226 aa8.83□□□□□ -1
USP39-212ENST00000465514 ABCD3P28288 659 aa8.83□□□□□ -1
USP39-212ENST00000465514 PTPN6P29350 595 aa8.83□□□□□ -1
USP39-212ENST00000465514 TYK2P29597 1187 aa8.83□□□□□ -1
USP39-212ENST00000465514 CCNG1P51959 295 aa8.83□□□□□ -1
USP39-212ENST00000465514 NAGLUP54802 743 aa8.83□□□□□ -1
USP39-212ENST00000465514 UAP1Q16222 522 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 SGO1Q5FBB7 561 aa8.83□□□□□ -1
USP39-212ENST00000465514 CCNYL2Q5T2Q4 361 aa8.83□□□□□ -1
USP39-212ENST00000465514 C6orf163Q5TEZ5 329 aa8.83□□□□□ -1
USP39-212ENST00000465514 FRG2Q64ET8 278 aa8.83□□□□□ -1
USP39-212ENST00000465514 TTC19Q6DKK2 380 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 DESI1Q6ICB0 168 aa8.83□□□□□ -1
USP39-212ENST00000465514 METTL2BQ6P1Q9 378 aaKnown RBP8.83□□□□□ -1
USP39-212ENST00000465514 ANGPTL8Q6UXH0 198 aa8.83□□□□□ -1
USP39-212ENST00000465514 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
USP39-212ENST00000465514 YRDCQ86U90 279 aaKnown RBP8.83□□□□□ -1
USP39-212ENST00000465514 PTGR2Q8N8N7 351 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 FAM83FQ8NEG4 500 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 C17orf47Q8NEP4 570 aa8.83□□□□□ -1
USP39-212ENST00000465514 OR52B6Q8NGF0 335 aa8.83□□□□□ -1
USP39-212ENST00000465514 OR1J4Q8NGS1 313 aa8.83□□□□□ -1
USP39-212ENST00000465514 MBD3L2Q8NHZ7 208 aaPredicted RBP8.83□□□□□ -1
USP39-212ENST00000465514 NTNG2Q96CW9 530 aa8.83□□□□□ -1
USP39-212ENST00000465514 TMEM41AQ96HV5 264 aa8.83□□□□□ -1
USP39-212ENST00000465514 FRG2BQ96QU4 278 aa8.83□□□□□ -1
USP39-212ENST00000465514 MRPL1Q9BYD6 325 aaKnown RBP8.83□□□□□ -1
USP39-212ENST00000465514 RAB17Q9H0T7 212 aa8.83□□□□□ -1
USP39-212ENST00000465514 NXF5Q9H1B4 397 aaKnown RBP8.83□□□□□ -1
USP39-212ENST00000465514 VPS11Q9H270 941 aa8.83□□□□□ -1
USP39-212ENST00000465514 CXorf56Q9H5V9 222 aa8.83□□□□□ -1
USP39-212ENST00000465514 METTL7AQ9H8H3 244 aa8.83□□□□□ -1
USP39-212ENST00000465514 CALHM2Q9HA72 323 aa8.83□□□□□ -1
USP39-212ENST00000465514 KLHL28Q9NXS3 571 aa8.83□□□□□ -1
USP39-212ENST00000465514 AHSPQ9NZD4 102 aa8.83□□□□□ -1
USP39-212ENST00000465514 ADAM29Q9UKF5 820 aa8.83□□□□□ -1
USP39-212ENST00000465514 DTX4Q9Y2E6 619 aa8.83□□□□□ -1
USP39-212ENST00000465514 MALRD1Q5VYJ5 2156 aa8.82□□□□□ -1
USP39-212ENST00000465514 ICOSLGO75144 302 aa8.82□□□□□ -1
USP39-212ENST00000465514 CDH16O75309 829 aa8.82□□□□□ -1
USP39-212ENST00000465514 PPM1BO75688 479 aa8.82□□□□□ -1
USP39-212ENST00000465514 ACTL6AO96019 429 aa8.82□□□□□ -1
USP39-212ENST00000465514 ALDOAP04075 364 aaKnown RBP8.82□□□□□ -1
USP39-212ENST00000465514 TMIGD3P0DMS9 266 aaPredicted RBP8.82□□□□□ -1
USP39-212ENST00000465514 NAGAP17050 411 aa8.82□□□□□ -1
USP39-212ENST00000465514 SOX18P35713 384 aa8.82□□□□□ -1
USP39-212ENST00000465514 CPOXP36551 454 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms