RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CHERPQ8IWX8 916 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 ST13P4Q8IZP2 240 aaPredicted RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 FAM162AQ96A26 154 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 RBM18Q96H35 190 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 SEPHS2Q99611 448 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 SEMA3GQ9NS98 782 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 C6orf47O95873 294 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 ATP1B1P05026 303 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 SOX11P35716 441 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 STT3AP46977 705 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 MLC1Q15049 377 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 NHSL2Q5HYW2 709 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 C6orf52Q5T4I8 152 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 ANKRD37Q7Z713 158 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 CBR4Q8N4T8 237 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 C7orf57Q8NEG2 295 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 METTL21AQ8WXB1 218 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 OR5P2Q8WZ92 322 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 DGAT2Q96PD7 388 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 GPN2Q9H9Y4 310 aaPredicted RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 PNO1Q9NRX1 252 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 OAZ3Q9UMX2 235 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 VPS4AQ9UN37 437 aa15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 MRPS18BQ9Y676 258 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-203ENST00000465229 IGF2RP11717 2491 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 DPPA5A6NC42 116 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 SAC3D1A6NKF1 404 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 TLX3O43711 291 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 OR10H2O60403 315 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 IFNA16P05015 189 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 MMP11P24347 488 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 SOX18P35713 384 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 HBA1P69905 142 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 CLN3Q13286 438 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 VEZF1Q14119 521 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 SSPNQ14714 243 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 LTB4RQ15722 352 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 C10orf111Q8N326 155 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 OR9A2Q8NGT5 310 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 DOK4Q8TEW6 326 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 PTPMT1Q8WUK0 201 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 KIAA1143Q96AT1 154 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 TPT1P8Q9HAU6 139 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 UBAP1Q9NZ09 502 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 CHD8Q9HCK8 2581 aa15.78■□□□□ 0.12
EXOSC3-203ENST00000465229 DMXL2Q8TDJ6 3036 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 NUP210LQ5VU65 1888 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 A8MUA0 341 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 CPSF4O95639 269 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 LIFP15018 202 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 MGAT2Q10469 447 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 HSPB3Q12988 150 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 VMACQ2NL98 169 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 PRICKLE4Q2TBC4 344 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 VASH2Q86V25 355 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 CARM1Q86X55 608 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 ZFP28Q8NHY6 868 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 PSMA8Q8TAA3 256 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 ZFP90Q8TF47 636 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 TFAP2CQ92754 450 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 RIT1Q92963 219 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 NCLNQ969V3 563 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 C8orf44Q96CB5 159 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 SLC47A1Q96FL8 570 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 PELOQ9BRX2 385 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 ANKRD60Q9BZ19 345 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 TRIM4Q9C037 500 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 ZNF696Q9H7X3 374 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 CXorf21Q9HAI6 301 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 TAS2R9Q9NYW1 312 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 DNAJB9Q9UBS3 223 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 DKK4Q9UBT3 224 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 SAMD4AQ9UPU9 718 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 HS3ST3B1Q9Y662 390 aa15.77■□□□□ 0.12
EXOSC3-203ENST00000465229 LOC102723996A0A087X1L8 192 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 IGHV3-20A0A0C4DH32 117 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 RNF103-CHMP3A0A140T963 221 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 SYNDIG1LA6NDD5 238 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 EIF4E1BA6NMX2 242 aaKnown RBP15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 TNFAIP8O95379 198 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 IGHEP01854 428 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 TNNI3P19429 210 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 NT5EP21589 574 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 GALNSP34059 522 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 CDK9P50750 372 aaKnown RBP15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 SRSF6Q13247 344 aaKnown RBP15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 ELAVL1Q15717 326 aaKnown RBP15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 ZNF628Q5EBL2 1059 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 FAM111BQ6SJ93 734 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 ZZZ3Q8IYH5 903 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 OR4A15Q8NGL6 344 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 FBXO30Q8TB52 745 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 KAT2AQ92830 837 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 CNBD2Q96M20 576 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 NTN4Q9HB63 628 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 ADAP2Q9NPF8 381 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 SIRT3Q9NTG7 399 aaPredicted RBP15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 WDR70Q9NW82 654 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 MAT2BQ9NZL9 334 aa15.76■□□□□ 0.11
EXOSC3-203ENST00000465229 PCDHGB4Q9UN71 923 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms