RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MRPL57Q9BQC6 102 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ACTL8Q9H568 366 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 UCK1Q9HA47 277 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SYTL2Q9HCH5 934 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 MED4Q9NPJ6 270 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 TMEM184CQ9NVA4 438 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 LUZP4Q9P127 313 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SEMA5BQ9P283 1151 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 C5AR2Q9P296 337 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 KLHL42Q9P2K6 505 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 GIMAP2Q9UG22 337 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 MID2Q9UJV3 735 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PTBP2Q9UKA9 531 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PCTPQ9UKL6 214 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 KLF2Q9Y5W3 355 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ANKHD1Q8IWZ3 2542 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 KCNE1BA0A087WTH5 132 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 GOLGA6L10A6NI86 522 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 C4orf51C9J302 202 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 E7EQ34 232 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 E2F3O00716 465 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 PFDN6O15212 129 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 KIF1CO43896 1103 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ZG16O60844 167 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SNNO75324 88 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 KIAA0754O94854 1291 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 GSTA1P08263 222 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 STSP08842 583 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ENO3P13929 434 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CAPN3P20807 821 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SERPINB3P29508 390 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SLC26A3P40879 764 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 RGS4P49798 205 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 NAGLUP54802 743 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 GFERP55789 205 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ATP6V0D1P61421 351 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 FOXM1Q08050 763 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TRAF3Q13114 568 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 RPA4Q13156 261 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 BIRC2Q13490 618 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 NAE1Q13564 534 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 RBMS2Q15434 407 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CHI3L2Q15782 390 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ZIC1Q15915 447 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 FAM83EQ2M2I3 478 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF678Q5SXM1 525 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 LGSNQ5TDP6 509 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 AGTRAPQ6RW13 159 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 WASH2PQ6VEQ5 465 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 PLD3Q8IV08 490 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 DCUN1D3Q8IWE4 304 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 LRRC34Q8IZ02 419 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ADGRF3Q8IZF5 1079 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF781Q8N8C0 355 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC63Q8NA47 563 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 FAM156AQ8NDB6 213 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 OR4E2Q8NGC2 313 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 OR9A1PQ8NGU1 263 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 RHEBL1Q8TAI7 183 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TRPC4APQ8TEL6 797 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CKAP2Q8WWK9 683 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 FBXL8Q96CD0 374 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 HS6ST2Q96MM7 605 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TSNARE1Q96NA8 513 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 TRAPPC9Q96Q05 1148 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 HBEGFQ99075 208 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 NUDT9Q9BW91 350 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ACAT2Q9BWD1 397 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 AICDAQ9GZX7 198 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 KIR3DX1Q9H7L2 352 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CNOT10Q9H9A5 744 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 PARVBQ9HBI1 364 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SLC40A1Q9NP59 571 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SEMA4BQ9NPR2 832 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 WASH6PQ9NQA3 447 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 INTS9Q9NV88 658 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ARL15Q9NXU5 204 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 NUDT4Q9NZJ9 180 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 CD274Q9NZQ7 290 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SENP1Q9P0U3 644 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 MARCOQ9UEW3 520 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 DCDC2Q9UHG0 476 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 ITGB1BP2Q9UKP3 347 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 SLC22A14Q9Y267 594 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 FARSAQ9Y285 508 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 B3GNT3Q9Y2A9 372 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 NTNG1Q9Y2I2 539 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 COPG1Q9Y678 874 aaKnown RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 MN1Q10571 1320 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-204ENST00000463622 MED13LQ71F56 2210 aa3.39□□□□□ -1.87
SCFD1-204ENST00000463622 OR6C74A6NCV1 312 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ARGFXA6NJG6 315 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PRSS44E7EML9 344 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FAM227AF5H4B4 570 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 EIF3FO00303 357 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms